RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ZNF385BQ569K4 471 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 OR2T5Q6IEZ7 315 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 YAF2Q8IY57 180 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 ZCCHC7Q8N3Z6 543 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 GOLM1Q8NBJ4 401 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PAPD5Q8NDF8 572 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 OR2T29Q8NH02 315 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 OR5K1Q8NHB7 308 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PRAP1Q96NZ9 151 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 KXD1Q9BQD3 176 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 LGR4Q9BXB1 951 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 ZCCHC2Q9C0B9 1178 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 ROGDIQ9GZN7 287 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SAGE1Q9NXZ1 904 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 GULP1Q9UBP9 304 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 KCNK6Q9Y257 313 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 LINC00854A0A1B0GVQ3 168 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PIPSLA2A3N6 862 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 TMEM247A6NEH6 219 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 GLOD5A6NK44 160 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PDZK1P1A8MUH7 402 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 FAM220BPB1ANY3 271 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PSIP1O75475 530 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 FADS2O95864 444 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 MATN1P21941 496 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 DDX6P26196 483 aaKnown RBP eCLIP11.09□□□□□ -0.638e-8■■■■□ 25.1
ARHGEF1-220ENST00000600274 MAP2K4P45985 399 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 ALDH3B2P48448 385 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 CLCNKAP51800 687 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 HBA1P69905 142 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 HSPB3Q12988 150 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 FAM9CQ8IZT9 166 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 TFGQ92734 400 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PLEKHA8Q96JA3 519 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 KCNC2Q96PR1 638 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SLC35A5Q9BS91 424 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 OSBPL10Q9BXB5 764 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SLC6A17Q9H1V8 727 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 KRT84Q9NSB2 600 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SLC23A2Q9UGH3 650 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SPEGQ15772 3267 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SLC5A10A0PJK1 596 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SCAMP2O15127 329 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SUV39H1O43463 412 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 AP2A2O94973 939 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 CCNDBP1O95273 360 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 KCNK5O95279 499 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 BMP10O95393 424 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 ANGPTL1O95841 491 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PRKAG1P54619 331 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 HTRA4P83105 476 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PIWIL3Q7Z3Z3 882 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 CYP4Z1Q86W10 505 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 OR9A1PQ8NGU1 263 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 NFKBIDQ8NI38 313 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 GLMNQ92990 594 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 EXOSC8Q96B26 276 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 ZNF707Q96C28 371 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 CHFRQ96EP1 664 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 F2RL3Q96RI0 385 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 MBOAT4Q96T53 435 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 PADI4Q9UM07 663 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 KLHL20Q9Y2M5 609 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 TMED5Q9Y3A6 229 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 ANKDD1BA6NHY2 528 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 MID1O15344 667 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 IL3P08700 152 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 NPPBP16860 134 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 RRM2P31350 389 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 NUDT6P53370 316 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 CDH12P55289 794 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 TUBA4AP68366 448 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 HNRNPA1L2Q32P51 320 aaKnown RBP11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 C6orf141Q5SZD1 244 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 TANGO2Q6ICL3 276 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 GRHL2Q6ISB3 625 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 RNF130Q86XS8 419 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 DCP2Q8IU60 420 aaKnown RBP11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 PSD4Q8NDX1 1056 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 WDR20Q8TBZ3 569 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 COX4I2Q96KJ9 171 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 LHPPQ9H008 270 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 EPB41L1Q9H4G0 881 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 CUEDC1Q9NWM3 386 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 MAFFQ9ULX9 164 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 TRPM6Q9BX84 2022 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 SPTBN5Q9NRC6 3674 aaKnown RBP11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 A0A1W2PP55 124 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 WASHC1A8K0Z3 465 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 H3BMQ9 156 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 M0R3G1 203 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 INMTO95050 263 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 NFATC1O95644 943 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 CCNA2P20248 432 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 CDH3P22223 829 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 TIE1P35590 1138 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 WNT3P56703 355 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 TAP2Q03519 686 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms