RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 HNF4AP41235 474 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 AVPR1BP47901 424 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 POLE2P56282 527 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 IRF8Q02556 426 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 RGS1Q08116 209 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 PWP1Q13610 501 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 ATP1A4Q13733 1029 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 ADNP2Q6IQ32 1131 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 TMIGD1Q6UXZ0 262 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 VN1R5Q7Z5H4 357 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 LAPTM4BQ86VI4 370 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 KRT78Q8N1N4 520 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 TMEM151AQ8N4L1 468 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 THAP4Q8WY91 577 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 MIEF2Q96C03 454 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 WDR34Q96EX3 536 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 PTCD3Q96EY7 689 aaKnown RBP14.43□□□□□ -0.1
LIG1-219ENST00000600055 WBP1Q96G27 269 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 MRPL57Q9BQC6 102 aaKnown RBP14.43□□□□□ -0.1
LIG1-219ENST00000600055 MESP1Q9BRJ9 268 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 TRIM55Q9BYV6 548 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 EHD1Q9H4M9 534 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 TMEM216Q9P0N5 145 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 ZNF490Q9ULM2 529 aaPredicted RBP14.43□□□□□ -0.1
LIG1-219ENST00000600055 PCSK5Q92824 1860 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 SEC16AO15027 2179 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 IGLV3-12A0A075B6K2 115 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 C4orf51C9J302 202 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 MASP2O00187 686 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 PRPF4O43172 522 aaKnown RBP eCLIP14.42□□□□□ -0.1
LIG1-219ENST00000600055 DNAJB6O75190 326 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 RDH16O75452 317 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 KLHL18O94889 574 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 EPB42P16452 691 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 EEF1DP29692 281 aaKnown RBP14.42□□□□□ -0.1
LIG1-219ENST00000600055 OCA2Q04671 838 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 KLC1Q07866 573 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 PCBP2Q15366 365 aaKnown RBP eCLIP14.42□□□□□ -0.15e-7■■■■■ 29.1
LIG1-219ENST00000600055 TOR1AIP1Q5JTV8 583 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 EMBQ6PCB8 327 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 GOLGA7Q7Z5G4 137 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 PPP1R32Q7Z5V6 425 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 MRGPREQ86SM8 312 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 TDRPQ86YL5 185 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 RAB43Q86YS6 212 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 AFAP1L2Q8N4X5 818 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 TRPV3Q8NET8 790 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 UTP15Q8TED0 518 aaKnown RBP14.42□□□□□ -0.1
LIG1-219ENST00000600055 CCT6BQ92526 530 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 CAVIN3Q969G5 261 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 SLC6A16Q9GZN6 736 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 MRPL46Q9H2W6 279 aaKnown RBP14.42□□□□□ -0.1
LIG1-219ENST00000600055 NT5DC2Q9H857 520 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 ANKHQ9HCJ1 492 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 HCN3Q9P1Z3 774 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 COPG2Q9UBF2 871 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 NAALAD2Q9Y3Q0 740 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 MAP4K5Q9Y4K4 846 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 ANGPTL3Q9Y5C1 460 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 SLC22A7Q9Y694 548 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 ATMQ13315 3056 aa14.42□□□□□ -0.1
LIG1-219ENST00000600055 TLDC2A0PJX2 215 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 H0YIG0 161 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 E2F3O00716 465 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 SMIM24O75264 130 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 JRKO75564 520 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 WFS1O76024 890 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 TBX6O95947 436 aaPredicted RBP14.41□□□□□ -0.1
LIG1-219ENST00000600055 SERPINA6P08185 405 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 ALOX12P18054 663 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 CASP2P42575 452 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 RAB8AP61006 207 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 OLR1P78380 273 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 GTF2H2Q13888 395 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 TBCCQ15814 346 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 DEFB134Q4QY38 66 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 GTF2H2CQ6P1K8 395 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 SH2D5Q6ZV89 423 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 RPS27LQ71UM5 84 aaKnown RBP14.41□□□□□ -0.1
LIG1-219ENST00000600055 ZC3H7AQ8IWR0 971 aaKnown RBP14.41□□□□□ -0.1
LIG1-219ENST00000600055 LSM14AQ8ND56 463 aaKnown RBP14.41□□□□□ -0.1
LIG1-219ENST00000600055 OR5T3Q8NGG3 340 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 ACMSDQ8TDX5 336 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 NSUN5Q96P11 429 aaKnown RBP14.41□□□□□ -0.1
LIG1-219ENST00000600055 CRB3Q9BUF7 120 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 EFCAB11Q9BUY7 163 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 ING2Q9H160 280 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 MKKSQ9NPJ1 570 aaPredicted RBP14.41□□□□□ -0.1
LIG1-219ENST00000600055 ACSS2Q9NR19 701 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 NXT1Q9UKK6 140 aaKnown RBP14.41□□□□□ -0.1
LIG1-219ENST00000600055 RAB21Q9UL25 225 aa14.41□□□□□ -0.1
LIG1-219ENST00000600055 ZFYVE26Q68DK2 2539 aa14.4□□□□□ -0.1
LIG1-219ENST00000600055 ANKDD1BA6NHY2 528 aa14.4□□□□□ -0.1
LIG1-219ENST00000600055 A8MT66 165 aa14.4□□□□□ -0.1
LIG1-219ENST00000600055 SOCS6O14544 535 aa14.4□□□□□ -0.1
LIG1-219ENST00000600055 GALR3O60755 368 aaPredicted RBP14.4□□□□□ -0.1
LIG1-219ENST00000600055 TUBBP07437 444 aa14.4□□□□□ -0.1
LIG1-219ENST00000600055 NUDT17P0C025 328 aa14.4□□□□□ -0.1
LIG1-219ENST00000600055 SMIM10L1P0DMW3 83 aa14.4□□□□□ -0.1
LIG1-219ENST00000600055 KRT15P19012 456 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms