RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 GDF10P55107 478 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 DLX5P56178 289 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 RWDD2BP57060 319 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 GBX1Q14549 363 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 SLC25A35Q3KQZ1 300 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 CTSL3PQ5NE16 218 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 THEMIS2Q5TEJ8 643 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 Q71RC1 249 aaPredicted RBP9.48□□□□□ -0.89
TRIM28-210ENST00000597618 VN1R4Q7Z5H5 301 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 CYP4Z2PQ8N1L4 340 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 ARMC10Q8N2F6 343 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 CAMKVQ8NCB2 501 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 ACRBPQ8NEB7 543 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 WFDC11Q8NEX6 87 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 PPHLN1Q8NEY8 458 aaKnown RBP9.48□□□□□ -0.89
TRIM28-210ENST00000597618 OR52N2Q8NGI0 321 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 OR10Q1Q8NGQ4 319 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 ZCCHC10Q8TBK6 192 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 CREB3L4Q8TEY5 395 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 THAP11Q96EK4 314 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 PWWP2AQ96N64 755 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 PKP4Q99569 1192 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 SMR3AQ99954 134 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 SARGQ9BW04 601 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 LANCL2Q9NS86 450 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 ABCF3Q9NUQ8 709 aa9.48□□□□□ -0.89
TRIM28-210ENST00000597618 OR14I1A6ND48 311 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 SAGE2PA6NJ88 616 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 A6NNC1 897 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 FAM171A2A8MVW0 826 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 FAM47E-STBD1D6RA91 191 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 E7ENX8 843 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 NPIPA2E9PIF3 369 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 NPIPA3F8WFD2 350 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 H3BMM5 538 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 H7BY64 318 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 ACOT7O00154 380 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 BCKDKO14874 412 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 RAF1P04049 648 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 TUBB4AP04350 444 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 FHP07954 510 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 INHBBP09529 407 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 MAGEA1P43355 309 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 MEF2AQ02078 507 aaPredicted RBP9.47□□□□□ -0.89
TRIM28-210ENST00000597618 TAP2Q03519 686 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 DEFB113Q30KQ7 82 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 GXYLT1Q4G148 440 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 CLEC9AQ6UXN8 241 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 B3GNT6Q6ZMB0 384 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 CDC20BQ86Y33 519 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 PDSS2Q86YH6 399 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 PPFIBP2Q8ND30 876 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 ZNF480Q8WV37 535 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 TBC1D20Q96BZ9 403 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 ARSGQ96EG1 525 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 PEX11GQ96HA9 241 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 PRAP1Q96NZ9 151 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 MDFIQ99750 246 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 TTYH2Q9BSA4 534 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 DEFB126Q9BYW3 111 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 FAM129AQ9BZQ8 928 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 TIMMDC1Q9NPL8 285 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 PNPLA3Q9NST1 481 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 TMEM184CQ9NVA4 438 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 CRIM1Q9NZV1 1036 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 NAALAD2Q9Y3Q0 740 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 DUSP10Q9Y6W6 482 aa9.47□□□□□ -0.89
TRIM28-210ENST00000597618 HEATR5BQ9P2D3 2071 aa9.46□□□□□ -0.89
TRIM28-210ENST00000597618 DNAJC13O75165 2243 aa9.46□□□□□ -0.89
TRIM28-210ENST00000597618 A0A0G2JNJ9 132 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 E7EVH7 732 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 NIPSNAP2O75323 286 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 ESR1P03372 595 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 HEXAP06865 529 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 SLC35G6P0C7Q6 338 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 GLI4P10075 376 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 GRIA1P42261 906 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 GPR85P60893 370 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 SKP1P63208 163 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 KEAP1Q14145 624 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 HERC3Q15034 1050 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 KLHL38Q2WGJ6 581 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 FLYWCH1Q4VC44 716 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 ACSBG2Q5FVE4 666 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 RNF187Q5TA31 235 aaPredicted RBP9.46□□□□□ -0.9
TRIM28-210ENST00000597618 TMEM198Q66K66 360 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 CAVIN1Q6NZI2 390 aaKnown RBP9.46□□□□□ -0.9
TRIM28-210ENST00000597618 AADACL2Q6P093 401 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 RGS9BPQ6ZS82 235 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 ASPGQ86U10 573 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 CYP4X1Q8N118 509 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 TMEM156Q8N614 296 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 FBXO15Q8NCQ5 510 aaPredicted RBP9.46□□□□□ -0.9
TRIM28-210ENST00000597618 OR5M9Q8NGP3 310 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 SPATA3Q8NHX4 192 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
TRIM28-210ENST00000597618 NANOS1Q8WY41 292 aaKnown RBP9.46□□□□□ -0.9
TRIM28-210ENST00000597618 FAM136AQ96C01 138 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms