RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 MMP11P24347 488 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 AGTR2P50052 363 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 STXBP1P61764 594 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 PCDH1Q08174 1060 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 CHIT1Q13231 466 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 KCNAB2Q13303 367 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 DOC2AQ14183 400 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 LY6DQ14210 128 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 NAA30Q147X3 362 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 RASA2Q15283 850 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 FAM69BQ5VUD6 431 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 TDRPQ86YL5 185 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 TEX9Q8N6V9 391 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 EXD3Q8N9H8 876 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 ANKRD53Q8N9V6 530 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 OR9A4Q8NGU2 314 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 BBC3Q96PG8 261 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 SPSB2Q99619 263 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 CRB3Q9BUF7 120 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 TGIF2Q9GZN2 237 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 SOX17Q9H6I2 414 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 CLK4Q9HAZ1 481 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 PRM3Q9NNZ6 103 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 ZNF358Q9NW07 568 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 TBK1Q9UHD2 729 aa16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 G3BP2Q9UN86 482 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 MRPS2Q9Y399 296 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-212ENST00000596163 ARGFXA6NJG6 315 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 KLHL41O60662 606 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 CLEC3AO75596 197 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 UMODP07911 640 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 GSTA1P08263 222 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 IL1RNP18510 177 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 TAC1P20366 129 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 IL10P22301 178 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 HSD17B3P37058 310 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 RBBP7Q16576 425 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 MRGPREQ86SM8 312 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 AFAP1L2Q8N4X5 818 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 DTWD1Q8N5C7 304 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 PTGR2Q8N8N7 351 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 AMER3Q8N944 861 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 CCT6BQ92526 530 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 SLC6A16Q9GZN6 736 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 ING2Q9H160 280 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 XPR1Q9UBH6 696 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 NAALAD2Q9Y3Q0 740 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 ZFYVE26Q68DK2 2539 aa16.39■□□□□ 0.21
SHKBP1-212ENST00000596163 ANKRD12Q6UB98 2062 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 HEATR5BQ9P2D3 2071 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 A0A088AWK7 358 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 STX16-NPEPL1H3BU86 382 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 SGK494L7N484 410 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 STX16O14662 325 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 CDH16O75309 829 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 KLHL18O94889 574 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 SHBGP04278 402 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 HEXBP07686 556 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 KRT15P19012 456 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 ZNF10P21506 573 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 SERPINB1P30740 379 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 HNF4AP41235 474 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 EMP2P54851 167 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 KLC1Q07866 573 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 TGM3Q08188 693 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 ATP1A4Q13733 1029 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 ERCC6LQ2NKX8 1250 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 VWA2Q5GFL6 755 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 OR51Q1Q8NH59 317 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 CREB3L4Q8TEY5 395 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 AENQ8WTP8 325 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 CAVIN3Q969G5 261 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 MOCOSQ96EN8 888 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 FAR2Q96K12 515 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 RHBGQ9H310 441 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 P4HTMQ9NXG6 502 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 ADGRE2Q9UHX3 823 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 C3orf18Q9UK00 162 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 ASB1Q9Y576 335 aa16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 V9GYY5 206 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-212ENST00000596163 AGPSO00116 658 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 UGDHO60701 494 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 GALR3O60755 368 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 WFS1O76024 890 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 CYC1P08574 325 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 ZNF888P0CJ79 500 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 PYGBP11216 843 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 EPORP19235 508 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 CCL11P51671 97 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 IFFO1Q0D2I5 559 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 GTF2H2Q13888 395 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 E2F2Q14209 437 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 DEFB134Q4QY38 66 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 TOR1AIP1Q5JTV8 583 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 LIPJQ5W064 366 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 GTF2H2CQ6P1K8 395 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 MED27Q6P2C8 311 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 SHISA6Q6ZSJ9 500 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms