RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ARFIP1P53367 373 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 MAPK10P53779 464 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 STXBP1P61764 594 aaKnown RBP11.6□□□□□ -0.55
DNMT1-218ENST00000589294 OCRLQ01968 901 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 CUL3Q13618 768 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 FAM53BQ14153 422 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 NDUFA9Q16795 377 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 ADPRMQ3LIE5 342 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 UGT3A2Q3SY77 523 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 C3orf38Q5JPI3 329 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 SH2D4BQ5SQS7 431 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 DEPDC1Q5TB30 811 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 KANK2Q63ZY3 851 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 PWWP2BQ6NUJ5 590 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 ATG14Q6ZNE5 492 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 TRIM46Q7Z4K8 759 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 AFAP1L2Q8N4X5 818 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 TTC29Q8NA56 475 aaPredicted RBP11.6□□□□□ -0.55
DNMT1-218ENST00000589294 SRFBP1Q8NEF9 429 aaKnown RBP11.6□□□□□ -0.55
DNMT1-218ENST00000589294 SELENOMQ8WWX9 145 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 FAR2Q96K12 515 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 C7orf26Q96N11 449 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 SORT1Q99523 831 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 MTERF1Q99551 399 aaKnown RBP11.6□□□□□ -0.55
DNMT1-218ENST00000589294 NDC1Q9BTX1 674 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 SLC6A16Q9GZN6 736 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 ZNF395Q9H8N7 513 aaPredicted RBP11.6□□□□□ -0.55
DNMT1-218ENST00000589294 APMAPQ9HDC9 416 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 TNFRSF12AQ9NP84 129 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 IRAK4Q9NWZ3 460 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 SRPK3Q9UPE1 567 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 NEUROG3Q9Y4Z2 214 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 TIMM22Q9Y584 194 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 PCDHGA7Q9Y5G6 932 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 SLC22A7Q9Y694 548 aa11.6□□□□□ -0.55
DNMT1-218ENST00000589294 MAGEB17A8MXT2 336 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SLCO1B7G3V0H7 640 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 ZNF749O43361 778 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SCRG1O75711 98 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 DXOO77932 396 aaKnown RBP11.59□□□□□ -0.55
DNMT1-218ENST00000589294 PDYNP01213 254 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SERPIND1P05546 499 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 CTSBP07858 339 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SMIM10L1P0DMW3 83 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SERPINB3P29508 390 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 ETV5P41161 510 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 GCGRP47871 477 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 HK2P52789 917 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 FOXA1P55317 472 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 GABREP78334 506 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 TGM3Q08188 693 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 HYAL2Q12891 473 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 CSTF3Q12996 717 aaKnown RBP11.59□□□□□ -0.55
DNMT1-218ENST00000589294 MUM1Q2TAK8 710 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 HKDC1Q2TB90 917 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SGO1Q5FBB7 561 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 KHDRBS2Q5VWX1 349 aaKnown RBP11.59□□□□□ -0.55
DNMT1-218ENST00000589294 TMEM214Q6NUQ4 689 aaKnown RBP11.59□□□□□ -0.55
DNMT1-218ENST00000589294 NIPAL1Q6NVV3 410 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 FOXR1Q6PIV2 292 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 MARCH9Q86YJ5 346 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 CRLF3Q8IUI8 442 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 TMEM126BQ8IUX1 230 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 ARHGEF39Q8N4T4 335 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 ZNF781Q8N8C0 355 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 CCT6BQ92526 530 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 MTFMTQ96DP5 389 aaKnown RBP11.59□□□□□ -0.55
DNMT1-218ENST00000589294 MVB12AQ96EY5 273 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SMIM10Q96HG1 83 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 LRFN5Q96NI6 719 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 KCNA7Q96RP8 456 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SERPINI1Q99574 410 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 CTRCQ99895 268 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 CENPKQ9BS16 269 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 SCNM1Q9BWG6 230 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 MS4A8Q9BY19 250 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 REXO4Q9GZR2 422 aaKnown RBP11.59□□□□□ -0.55
DNMT1-218ENST00000589294 CLK4Q9HAZ1 481 aaKnown RBP11.59□□□□□ -0.55
DNMT1-218ENST00000589294 DMRT3Q9NQL9 472 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 STARD5Q9NSY2 213 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 VTI1BQ9UEU0 232 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 RUVBL1Q9Y265 456 aaKnown RBP11.59□□□□□ -0.55
DNMT1-218ENST00000589294 MSRB2Q9Y3D2 182 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 DNAJC15Q9Y5T4 150 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 B3GALT1Q9Y5Z6 326 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 CACNA1AO00555 2505 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 PTPRBP23467 1997 aa11.59□□□□□ -0.55
DNMT1-218ENST00000589294 TRABD2BA6NFA1 517 aa11.58□□□□□ -0.56
DNMT1-218ENST00000589294 C9orf172C9J069 976 aa11.58□□□□□ -0.56
DNMT1-218ENST00000589294 SLC28A1O00337 649 aa11.58□□□□□ -0.56
DNMT1-218ENST00000589294 P2RX6O15547 441 aa11.58□□□□□ -0.56
DNMT1-218ENST00000589294 TBX6O95947 436 aaPredicted RBP11.58□□□□□ -0.56
DNMT1-218ENST00000589294 TGFB1P01137 390 aa11.58□□□□□ -0.56
DNMT1-218ENST00000589294 ADRB1P08588 477 aa11.58□□□□□ -0.56
DNMT1-218ENST00000589294 CD82P27701 267 aa11.58□□□□□ -0.56
DNMT1-218ENST00000589294 TSFMP43897 325 aaKnown RBP11.58□□□□□ -0.56
DNMT1-218ENST00000589294 RPS13P62277 151 aaKnown RBP11.58□□□□□ -0.56
DNMT1-218ENST00000589294 SKP1P63208 163 aa11.58□□□□□ -0.56
DNMT1-218ENST00000589294 CYP4F2P78329 520 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms