RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FOXK2Q01167 660 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 RGS1Q08116 209 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 HYAL2Q12891 473 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 DDX39BQ13838 428 aaKnown RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 TGIF1Q15583 401 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 ZRSR2Q15696 482 aaKnown RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 MUM1Q2TAK8 710 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 FAM214AQ32MH5 1076 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 HHATQ5VTY9 493 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 YOD1Q5VVQ6 348 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 ZNF385CQ66K41 422 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 TMEM214Q6NUQ4 689 aaKnown RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 DTX1Q86Y01 620 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 DSELQ8IZU8 1212 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 NLGN4XQ8N0W4 816 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 RNF175Q8N4F7 328 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 METTL27Q8N6F8 245 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 NLGN4YQ8NFZ3 816 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 SNIP1Q8TAD8 396 aaKnown RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 WDR20Q8TBZ3 569 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 SREK1Q8WXA9 508 aaKnown RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 LRFN5Q96NI6 719 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 GBP5Q96PP8 586 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 SHCBP1LQ9BZQ2 653 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 SLC6A16Q9GZN6 736 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 AICDAQ9GZX7 198 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 AKIRIN1Q9H9L7 192 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 MID1IP1Q9NPA3 183 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 NKIRAS1Q9NYS0 192 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 NDOR1Q9UHB4 597 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 PCDHGA11Q9Y5H2 935 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 A0A1B0GX78 115 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 MEN1O00255 615 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 CLEC3AO75596 197 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 SERPINA6P08185 405 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 ATXN8OSP0DMR3 200 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 ALAS2P22557 587 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 EMP3P54852 163 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 PKNOX1P55347 436 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 MAP7Q14244 749 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 TOR1AIP1Q5JTV8 583 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 GARNL3Q5VVW2 1013 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 CES4AQ5XG92 561 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 CDYL2Q8N8U2 506 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 OR6Y1Q8NGX8 325 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 PROKR1Q8TCW9 393 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 ZNF473Q8WTR7 871 aaKnown RBP18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 NAF1Q96HR8 494 aaKnown RBP18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 SEC16BQ96JE7 1060 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 KCNA7Q96RP8 456 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 PRM3Q9NNZ6 103 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 TNFRSF12AQ9NP84 129 aa18.05■□□□□ 0.48
CLPTM1-209ENST00000588855 C4orf51C9J302 202 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 DYNC1I1O14576 645 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 NPHS1O60500 1241 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 ESRRBO95718 433 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 CAPN1P07384 714 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 ITGAXP20702 1163 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 HNRNPH1P31943 449 aaKnown RBP18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 ATP1A2P50993 1020 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 RCN2Q14257 317 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 CHI3L2Q15782 390 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 TCHHL1Q5QJ38 904 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 MANEAQ5SRI9 462 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 LCN10Q6JVE6 187 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 FAM199XQ6PEV8 388 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 PRSS41Q7RTY9 318 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 CACNA2D3Q8IZS8 1091 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 ESX1Q8N693 406 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 HUS1BQ8NHY5 278 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 NKD1Q969G9 470 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 REPS1Q96D71 796 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 CNDP1Q96KN2 507 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 MAGEB10Q96LZ2 347 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 MTERF1Q99551 399 aaKnown RBP18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 KLHL31Q9H511 634 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 LHX9Q9NQ69 397 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 DMRT3Q9NQL9 472 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 TSC22D4Q9Y3Q8 395 aa18.04■□□□□ 0.48
CLPTM1-209ENST00000588855 ATP8B1O43520 1251 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 FOXS1O43638 330 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 CHRNGP07510 517 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 ZNF888P0CJ79 500 aaPredicted RBP18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 IL1RNP18510 177 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 BGNP21810 368 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 SERPINB1P30740 379 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 ARRB2P32121 409 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 NEK2P51955 445 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 NDUFA9Q16795 377 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 TTC19Q6DKK2 380 aaPredicted RBP18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 ATG14Q6ZNE5 492 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 ZNF248Q8NDW4 579 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 PPP1R14CQ8TAE6 165 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 ZCCHC14Q8WYQ9 949 aaKnown RBP18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 MR1Q95460 341 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 MTFMTQ96DP5 389 aaKnown RBP18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 TRMOQ9BU70 441 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 MS4A8Q9BY19 250 aa18.03■□□□□ 0.48
CLPTM1-209ENST00000588855 LAMA5O15230 3695 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms