RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TTI1O43156 1089 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 MAN1A2O60476 641 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 PRAMEF2O60811 474 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 WISP2O76076 250 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 RASAL1O95294 804 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 ITGA8P53708 1063 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 AP1S2P56377 157 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 AP2B1P63010 937 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 DR1Q01658 176 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 ACTN3Q08043 901 aaPredicted RBP13.51□□□□□ -0.25
VMP1-206ENST00000587945 ZNF460Q14592 562 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 FASTKD3Q14CZ7 662 aaKnown RBP13.51□□□□□ -0.25
VMP1-206ENST00000587945 ABRAXAS2Q15018 415 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 NSDHLQ15738 373 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 DEFB134Q4QY38 66 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 SFT2D3Q587I9 215 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 SBSNQ6UWP8 590 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 GFRALQ6UXV0 394 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 CREG2Q8IUH2 290 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 BEST3Q8N1M1 668 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 SUN3Q8TAQ9 357 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 SLC5A11Q8WWX8 675 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 NEIL2Q969S2 332 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 NPAS2Q99743 824 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 KCNK13Q9HB14 408 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 TEKT2Q9UIF3 430 aa13.51□□□□□ -0.25
VMP1-206ENST00000587945 TRBC2A0A5B9 178 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 CDC7O00311 574 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 CHST10O43529 356 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 GALR3O60755 368 aaPredicted RBP13.5□□□□□ -0.25
VMP1-206ENST00000587945 CYC1P08574 325 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 ZNF888P0CJ79 500 aaPredicted RBP13.5□□□□□ -0.25
VMP1-206ENST00000587945 ALOX12P18054 663 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 HNF4AP41235 474 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 SCTRP47872 440 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 AGTR2P50052 363 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 ARL4CP56559 192 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 PER3P56645 1201 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 GNG11P61952 73 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 CSHL1Q14406 222 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 HERC3Q15034 1050 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 ZRSR2Q15696 482 aaKnown RBP13.5□□□□□ -0.25
VMP1-206ENST00000587945 INAQ16352 499 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 ACER2Q5QJU3 275 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 H3F3CQ6NXT2 135 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 PAPD4Q6PIY7 484 aaKnown RBP13.5□□□□□ -0.25
VMP1-206ENST00000587945 SYDE1Q6ZW31 735 aaPredicted RBP13.5□□□□□ -0.25
VMP1-206ENST00000587945 CRLF3Q8IUI8 442 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 PLPP5Q8NEB5 264 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 ATL1Q8WXF7 558 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 PDLIM5Q96HC4 596 aaKnown RBP13.5□□□□□ -0.25
VMP1-206ENST00000587945 ZNF354BQ96LW1 612 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 SARGQ9BW04 601 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 HES7Q9BYE0 225 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 FAM129AQ9BZQ8 928 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 ANKRD10Q9NXR5 420 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 CORO1CQ9ULV4 474 aaPredicted RBP13.5□□□□□ -0.25
VMP1-206ENST00000587945 HEATR5BQ9P2D3 2071 aa13.5□□□□□ -0.25
VMP1-206ENST00000587945 NPEPPSL1A6NEC2 478 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 TP73O15350 636 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 B4GALT2O60909 372 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 PIAS1O75925 651 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 SEC31AO94979 1220 aaKnown RBP13.49□□□□□ -0.25
VMP1-206ENST00000587945 UNC5CO95185 931 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 FHP07954 510 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 ENO2P09104 434 aaPredicted RBP13.49□□□□□ -0.25
VMP1-206ENST00000587945 ZNF37AP17032 561 aaPredicted RBP13.49□□□□□ -0.25
VMP1-206ENST00000587945 OR4D2P58180 307 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 TAS2R39P59534 338 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 RAB8AP61006 207 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 MRPS25P82663 173 aaKnown RBP13.49□□□□□ -0.25
VMP1-206ENST00000587945 REEP5Q00765 189 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 RGS1Q08116 209 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 MGAT5Q09328 741 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 PDIA2Q13087 525 aaKnown RBP13.49□□□□□ -0.25
VMP1-206ENST00000587945 PWP1Q13610 501 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 TUBA3CQ13748 450 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 EXT1Q16394 746 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 PPP1R3AQ16821 1122 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 ZNF766Q5HY98 468 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 STRA8Q7Z7C7 330 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 TMPRSS11BQ86T26 416 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 THOC6Q86W42 341 aaKnown RBP13.49□□□□□ -0.25
VMP1-206ENST00000587945 ZC3HC1Q86WB0 502 aaKnown RBP13.49□□□□□ -0.25
VMP1-206ENST00000587945 ANKRD53Q8N9V6 530 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 FBXO36Q8NEA4 188 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 M1APQ8TC57 530 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 TBC1D20Q96BZ9 403 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 LRRC39Q96DD0 335 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 SIGLEC12Q96PQ1 595 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 OR1F2PQ96R84 312 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 KLHL31Q9H511 634 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 MMP25Q9NPA2 562 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 KLHL1Q9NR64 748 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 ZFATQ9P243 1243 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 ABI3Q9P2A4 366 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 ZFP69BQ9UJL9 534 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 SLC22A14Q9Y267 594 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms