RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 LIPJQ5W064 366 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 FRG2Q64ET8 278 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 ANKRD34AQ69YU3 496 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 HMBOX1Q6NT76 420 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SLC2A7Q6PXP3 512 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SCIMPQ6UWF3 145 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SHISA2Q6UWI4 295 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 B3GNT6Q6ZMB0 384 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 ERN2Q76MJ5 926 aaKnown RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 DPPA4Q7L190 304 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 ZNF765Q7L2R6 523 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 AMIGO2Q86SJ2 522 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 TSPAN33Q86UF1 283 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 ZSWIM9Q86XI8 627 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 RASGRP3Q8IV61 690 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 RIMKLAQ8IXN7 391 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 EID3Q8N140 333 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 TMEM132CQ8N3T6 1108 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SVOPLQ8N434 492 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 CBR4Q8N4T8 237 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 DHRSXQ8N5I4 330 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 TRIML2Q8N7C3 387 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 ZNF513Q8N8E2 541 aaPredicted RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 SNX31Q8N9S9 440 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 CHST14Q8NCH0 376 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 FBXO15Q8NCQ5 510 aaPredicted RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 DDHD1Q8NEL9 900 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 OR2T12Q8NG77 320 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 RPLP0P6Q8NHW5 317 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 ZFP28Q8NHY6 868 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 PNPT1Q8TCS8 783 aaKnown RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 LKAAEAR1Q8TD35 194 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SELENOMQ8WWX9 145 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SORCS1Q8WY21 1168 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 GTF2H4Q92759 462 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 ATOH1Q92858 354 aaPredicted RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 ESAMQ96AP7 390 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 VOPP1Q96AW1 172 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SDCCAG3Q96C92 435 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 REPS1Q96D71 796 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 ZNF514Q96K75 400 aaPredicted RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 TEX37Q96LM6 180 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 CCDC138Q96M89 665 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 FOPNLQ96NB1 174 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 FRG2BQ96QU4 278 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 TM9SF2Q99805 663 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 GABRG3Q99928 467 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 THUMPD3Q9BV44 507 aaKnown RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 CHID1Q9BWS9 393 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SPATA9Q9BWV2 254 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 RSPH9Q9H1X1 276 aaPredicted RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 ACTL8Q9H568 366 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 OLAHQ9NV23 265 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 SMPD3Q9NY59 655 aaPredicted RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 DNAJB9Q9UBS3 223 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 PDE10AQ9Y233 779 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 MAN2B2Q9Y2E5 1009 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 RNF11Q9Y3C5 154 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 POLR3HQ9Y535 204 aaPredicted RBP5.55□□□□□ -1.52
SDF2-206ENST00000587788 ASB1Q9Y576 335 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 PLXNA2O75051 1894 aa5.55□□□□□ -1.52
SDF2-206ENST00000587788 DOCK9Q9BZ29 2069 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 TMEM131Q92545 1883 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 DMDP11532 3685 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 KCNE1BA0A087WTH5 132 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ELOVL7A1L3X0 281 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PRAMEF27A3QJZ7 478 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 KLHL33A6NCF5 533 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 TRIM64CA6NLI5 447 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 EVPLLA8MZ36 301 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 FAM220BPB1ANY3 271 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 SOCS2O14508 198 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 TNFRSF10CO14798 259 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 CLGNO14967 610 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 AREL1O15033 823 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ACOX3O15254 700 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 GPR39O43194 453 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PSIP1O75475 530 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 RECQL5O94762 991 aaPredicted RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 CATP04040 527 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 DNTTP04053 509 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 JUPP14923 745 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 CKMT2P17540 419 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 LHCGRP22888 699 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PPIBP23284 216 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 CAPGP40121 348 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 NBL1P41271 181 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 IL12RB1P42701 662 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ASMTP46597 345 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 CXCL12P48061 93 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 RXRGP48443 463 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PXNP49023 591 aaPredicted RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 RPS6KA3P51812 740 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 B4GALNT1Q00973 533 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 DPTQ07507 201 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 HSPA14Q0VDF9 509 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 SRSF5Q13243 272 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 LSAMPQ13449 338 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 BIRC2Q13490 618 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms