RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 INTS7Q9NVH2 962 aaKnown RBP8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 OXSMQ9NWU1 459 aa8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 TMEM9Q9P0T7 183 aa8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 PCTPQ9UKL6 214 aa8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 ACSL6Q9UKU0 697 aa8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 SH2B3Q9UQQ2 575 aa8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 KLHL20Q9Y2M5 609 aa8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 PCDHGA7Q9Y5G6 932 aa8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 TNPO3Q9Y5L0 923 aaKnown RBP8.09□□□□□ -1.11
NEDD4L-218ENST00000587547 ITPR3Q14573 2671 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 A8MU76 341 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 K7EPI3 171 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 MATN2O00339 956 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 BIRC5O15392 142 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 KIF1CO43896 1103 aaKnown RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 FBXO24O75426 580 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 RASSF9O75901 435 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 CCNDBP1O95273 360 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 RPS17P08708 135 aaKnown RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 DHRS4L1P0CG22 281 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 FGF3P11487 239 aaPredicted RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 BMP4P12644 408 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 CDH1P12830 882 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 PVRP15151 417 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 IMPDH1P20839 514 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 BGNP21810 368 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 CCND1P24385 295 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 COL8A1P27658 744 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 PRDX3P30048 256 aaKnown RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 CMPK1P30085 196 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 GGT5P36269 586 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 UQCRFS1P47985 274 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 SLC18A1P54219 525 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 NAGLUP54802 743 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 CDH13P55290 713 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 POLE2P56282 527 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 DNAJB13P59910 316 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 YBX1P67809 324 aaKnown RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 CDC16Q13042 620 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 KCNAB2Q13303 367 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 SPIDRQ14159 915 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 ZNF678Q5SXM1 525 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 ZNF468Q5VIY5 522 aaPredicted RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 SPESP1Q6UW49 350 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 LCTLQ6UWM7 567 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 ADCK2Q7Z695 626 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 TMPRSS11BQ86T26 416 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 C17orf64Q86WR6 236 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 ARFGAP2Q8N6H7 521 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 OR2A1Q8NGT9 310 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 FAM76AQ8TAV0 307 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 TRPC4APQ8TEL6 797 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 ATP6V1E2Q96A05 226 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 SLC22A18Q96BI1 424 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 L3HYPDHQ96EM0 354 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 ZDHHC12Q96GR4 267 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 OR4K3Q96R72 315 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 MAP3K3Q99759 626 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 HAUS8Q9BT25 410 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 GATA5Q9BWX5 397 aaPredicted RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 SHCBP1LQ9BZQ2 653 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 BHLHE41Q9C0J9 482 aaPredicted RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 PCBD2Q9H0N5 130 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 RASSF4Q9H2L5 321 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 NOL11Q9H8H0 719 aaKnown RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 MRPS30Q9NP92 439 aaKnown RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 INTS9Q9NV88 658 aaKnown RBP8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 ANAPC2Q9UJX6 822 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 POMT2Q9UKY4 750 aa8.08□□□□□ -1.12
NEDD4L-218ENST00000587547 MN1Q10571 1320 aaPredicted RBP8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 POLQO75417 2590 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 A0A0J9YY10 115 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 TLCD2A6NGC4 264 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 SLC9B1P1A6NJY1 282 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 D6RAR5 112 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 E7EQ34 232 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 E2F3O00716 465 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 LCE2BO14633 110 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 PRICKLE3O43900 615 aaPredicted RBP8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 KATNA1O75449 491 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 AGFG2O95081 481 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 CPNE6O95741 557 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 GHRHP01286 108 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 NPPBP16860 134 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 MAGP20916 626 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 ELAVL4P26378 380 aaKnown RBP8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 PIK3CGP48736 1102 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 CD97P48960 835 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 SEPHS1P49903 392 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 CCNG1P51959 295 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 MEF2AQ02078 507 aaPredicted RBP8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 CLCQ05315 142 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 SLC5A12Q1EHB4 618 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 XKR6Q5GH73 641 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 CATSPEREQ5SY80 951 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 PHF19Q5T6S3 580 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 CACHD1Q5VU97 1274 aa8.07□□□□□ -1.12
NEDD4L-218ENST00000587547 TMPRSS9Q7Z410 1059 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms