RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 HDHD2Q9H0R4 259 aa13.27□□□□□ -0.28
CACNA1A-209ENST00000587525 TBC1D17Q9HA65 648 aa13.27□□□□□ -0.28
CACNA1A-209ENST00000587525 CCL26Q9Y258 94 aa13.27□□□□□ -0.28
CACNA1A-209ENST00000587525 GPSM3Q9Y4H4 160 aa13.27□□□□□ -0.28
CACNA1A-209ENST00000587525 LOXHD1Q8IVV2 1947 aa13.27□□□□□ -0.28
CACNA1A-209ENST00000587525 ATG13O75143 517 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 ATP4BP51164 291 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 CTSCP53634 463 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 ARPC4P59998 168 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 ST3GAL4Q11206 333 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 CDK5R2Q13319 367 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 VMACQ2NL98 169 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 CAPN13Q6MZZ7 669 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 C22orf39Q6P5X5 142 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 SLC5A8Q8N695 610 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 FAM83FQ8NEG4 500 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 ZNF334Q9HCZ1 680 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 TMED5Q9Y3A6 229 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 SLC31A1O15431 190 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 ALPLP05186 524 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 EPHX1P07099 455 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 EBLN1P0CF75 366 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 PSMD8P48556 350 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 MAPK12P53778 367 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 GRIN2CQ14957 1233 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 INAVAQ3KP66 663 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 SYCE2Q6PIF2 218 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 WDR53Q7Z5U6 358 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 TCEAL4Q96EI5 215 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 KCNK12Q9HB15 430 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 TAC3Q9UHF0 121 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 MKI67P46013 3256 aaKnown RBP13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.29
CACNA1A-209ENST00000587525 A0A1W2PRB8 838 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 TRBC2A0A5B9 178 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 H7BY64 318 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 TAPBPO15533 448 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 IGLV3-25P01717 112 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CYP2A6P11509 494 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 PRPS2P11908 318 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 PRPS1L1P21108 318 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CRHBPP24387 322 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 RYKP34925 604 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 MAGEA11P43364 429 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 MCCD1P59942 119 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 RAB8AP61006 207 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 RING1Q06587 406 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 TOP3AQ13472 1001 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 SCARB2Q14108 478 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 DUOXA1Q1HG43 343 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CTU2Q2VPK5 515 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 GCNT6Q5T4J0 391 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 MED27Q6P2C8 311 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 FAM131AQ6UXB0 335 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CD300LGQ6UXG3 332 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 GDPD4Q6W3E5 623 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 BCDIN3DQ7Z5W3 292 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 FAM9CQ8IZT9 166 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 IQCF1Q8N6M8 205 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 OR10G6Q8NH81 332 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 SUN5Q8TC36 379 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 PRAP1Q96NZ9 151 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CLN6Q9NWW5 311 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 TUBA8Q9NY65 449 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 COMMD3Q9UBI1 195 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 ANGPT4Q9Y264 503 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 UGT2A1Q9Y4X1 527 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 FHP07954 510 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 FAM163BP0C2L3 166 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CSF2RAP15509 400 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 DNAJA1P31689 397 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CLK3P49761 638 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CLCN7P51798 805 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 ABHD18Q0P651 414 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 SNAP47Q5SQN1 464 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 TRIM40Q6P9F5 258 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 PLEKHG7Q6ZR37 379 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 GALNT12Q8IXK2 581 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 TCAIMQ8N3R3 496 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 PCNPQ8WW12 178 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 HDAC2Q92769 488 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 MYDGFQ969H8 173 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 HTATIP2Q9BUP3 242 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 MS4A12Q9NXJ0 267 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 SRRDQ9UH36 339 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 DRGXA6NNA5 263 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 ISM1B1AKI9 464 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 LEFTY2O00292 366 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 FRS3O43559 492 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 ADAMTS4O75173 837 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 GADD45AP24522 165 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 RACK1P63244 317 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 ID2Q02363 134 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 DBPQ10586 325 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 CLCA4Q14CN2 919 aa13.26□□□□□ -0.29
CACNA1A-209ENST00000587525 C9orf64Q5T6V5 341 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms