RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 ALG11Q2TAA5 492 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CDKL4Q5MAI5 379 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RPUSD3Q6P087 351 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 OGFOD3Q6PK18 319 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 OR8H3Q8N146 312 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LKAAEAR1Q8TD35 194 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RUBCNLQ9H714 662 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SLC6A13Q9NSD5 602 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 UBA2Q9UBT2 640 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PCTPQ9UKL6 214 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SH3BGRLO75368 114 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MLYCDO95822 493 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CD160O95971 181 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 OPRL1P41146 370 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MAP2K4P45985 399 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HSPA7P48741 367 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CYP4F2P78329 520 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CYP4F3Q08477 520 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 STARD3Q14849 445 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CCNYL2Q5T2Q4 361 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RNF219Q5W0B1 726 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 XAF1Q6GPH4 301 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GPSM1Q86YR5 675 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 KIAA1191Q96A73 305 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 COX4I2Q96KJ9 171 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 AMBRA1Q9C0C7 1298 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TRIM45Q9H8W5 580 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PDE7BQ9NP56 450 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SCUBE2Q9NQ36 999 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LEF1Q9UJU2 399 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 INSL6Q9Y581 213 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TRANK1O15050 2925 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MEX3AA1L020 520 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TRIM77I1YAP6 450 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 UPK1AO00322 258 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NRG2O14511 850 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TBL1XO60907 577 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ADAM23O75077 832 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RBBP9O75884 186 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GPIP06744 558 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RHOCP08134 193 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SNRNP70P08621 437 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 THRBP10828 461 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DCKP27707 260 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FMO3P31513 532 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PPM1AP35813 382 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RAB14P61106 215 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DCAF7P61962 342 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ADARB1P78563 741 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ARF5P84085 180 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SPIDRQ14159 915 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 AP5B1Q2VPB7 878 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FAM174BQ3ZCQ3 159 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TMEM236Q5W0B7 351 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SLC22A25Q6T423 547 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GPRIN3Q6ZVF9 776 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GAREM2Q75VX8 874 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 IGFN1Q86VF2 1251 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LINC00518Q8N0U6 118 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 OR8K3Q8NH51 312 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 UBE2FQ969M7 185 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 REXO5Q96IC2 774 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF599Q96NL3 588 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MGME1Q9BQP7 344 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SEC22CQ9BRL7 303 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BDH2Q9BUT1 245 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TTLL2Q9BWV7 592 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MIR1-1HGQ9H1L0 117 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ACTL8Q9H568 366 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PLSCR4Q9NRQ2 329 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NLE1Q9NVX2 485 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ASH2LQ9UBL3 628 aa11.22□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SMAD6O43541 496 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PI15O43692 258 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PRKD3O94806 890 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SLITRK5O94991 958 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LRATO95237 230 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HTR1AP08908 422 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SUOXP51687 545 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TRA2BP62995 288 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 S100A12P80511 92 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CHRNB3Q05901 458 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TYSND1Q2T9J0 566 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PGS1Q32NB8 556 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ADGRF1Q5T601 910 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PRMT9Q6P2P2 845 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CYP20A1Q6UW02 462 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TMEM150AQ86TG1 271 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 COMTD1Q86VU5 262 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 KREMEN2Q8NCW0 462 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CD200R1Q8TD46 325 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SMG7Q92540 1137 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BORCS5Q969J3 196 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FUNDC2Q9BWH2 189 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ALOXE3Q9BYJ1 711 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TRIM54Q9BYV2 358 aa11.21□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms