RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 KRT78Q8N1N4 520 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 ZNF655Q8N720 491 aaPredicted RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 TTC29Q8NA56 475 aaPredicted RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 MFSD9Q8NBP5 474 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 SLC38A9Q8NBW4 561 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 PROKR1Q8TCW9 393 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 APOBEC4Q8WW27 367 aaKnown RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 MR1Q95460 341 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 RERGQ96A58 199 aaPredicted RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 ESAMQ96AP7 390 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 TM4SF19Q96DZ7 209 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 PHF21BQ96EK2 531 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 NTMT1Q9BV86 223 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 ERVK-6Q9BXR3 956 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 GPR87Q9BY21 358 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 NLNQ9BYT8 704 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 SLC25A18Q9H1K4 315 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 TMBIM4Q9HC24 238 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 ABCF3Q9NUQ8 709 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 ZFP69BQ9UJL9 534 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 TUBD1Q9UJT1 453 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 PCTPQ9UKL6 214 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 STK38LQ9Y2H1 464 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 RRP15Q9Y3B9 282 aaKnown RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 TSC22D4Q9Y3Q8 395 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 ASB1Q9Y576 335 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 SPTA1P02549 2419 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 CCDC88CQ9P219 2028 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 CDC14CA4D256 554 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 H0YGG7 62 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 J3QKU1 62 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 AGPSO00116 658 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 MEN1O00255 615 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 TM9SF1O15321 606 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 SLC28A2O43868 658 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 NRP2O60462 931 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 SIX3O95343 332 aaPredicted RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 ONECUT2O95948 504 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 KLK3P07288 261 aaPredicted RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 FURINP09958 794 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 MYL2P10916 166 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 PTPN4P29074 926 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 EEF1DP29692 281 aaKnown RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 SERPINB1P30740 379 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 RORAP35398 523 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 HNF4AP41235 474 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 ARF3P61204 181 aaPredicted RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 RPS15P62841 145 aaKnown RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 IRF8Q02556 426 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 ASPHQ12797 758 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 CHIT1Q13231 466 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 PWP1Q13610 501 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 PRTGQ2VWP7 1150 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 GGTA1PQ4G0N0 100 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 ZNF678Q5SXM1 525 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 CATSPEREQ5SY80 951 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 C10orf62Q5T681 223 aaPredicted RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 AGBL2Q5U5Z8 902 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 FRMPD2BQ6IN97 320 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 GRHL2Q6ISB3 625 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 NIPAL1Q6NVV3 410 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 TMIGD1Q6UXZ0 262 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 ZNF517Q6ZMY9 492 aaPredicted RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 GOLGA7Q7Z5G4 137 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 LAS2Q8IYD9 372 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 ARHGEF39Q8N4T4 335 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 TEX9Q8N6V9 391 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 SNX31Q8N9S9 440 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 L3MBTL4Q8NA19 623 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 CAMKVQ8NCB2 501 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 TRPV3Q8NET8 790 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 TCP10LQ8TDR4 215 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 ZNF483Q8TF39 744 aaPredicted RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 ITFG2Q969R8 447 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 UBE2E3Q969T4 207 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 TLCD1Q96CP7 247 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 MVB12AQ96EY5 273 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 PAIP2Q9BPZ3 127 aaKnown RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 CHST8Q9H2A9 424 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 ACTR5Q9H9F9 607 aaPredicted RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 OXSMQ9NWU1 459 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 ADGRE2Q9UHX3 823 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 POLHQ9Y253 713 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 FARSAQ9Y285 508 aaKnown RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 ANGPTL3Q9Y5C1 460 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 HEMK1Q9Y5R4 338 aaPredicted RBP9.42□□□□□ -0.9
GGA3-209ENST00000580646 NUP210LQ5VU65 1888 aa9.42□□□□□ -0.9
GGA3-209ENST00000580646 MYO18BQ8IUG5 2567 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 TLN1Q9Y490 2541 aaKnown RBP9.41□□□□□ -0.9
GGA3-209ENST00000580646 LOC105369274A0A096LPK9 316 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 LOC102723532A0A0G2JNH3 316 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 H0YIV9 168 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ZNF749O43361 778 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 LCMT2O60294 686 aaKnown RBP9.41□□□□□ -0.9
GGA3-209ENST00000580646 PRAMEF4O60810 478 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 CLEC3AO75596 197 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ZWINTO95229 277 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 OTCP00480 354 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 SLC35G6P0C7Q6 338 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 CPA3P15088 417 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms