RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 KIRREL3Q8IZU9 778 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 AFAP1L2Q8N4X5 818 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 TTC29Q8NA56 475 aaPredicted RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 HUS1BQ8NHY5 278 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 PPP1R14CQ8TAE6 165 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 PROKR1Q8TCW9 393 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 SLC13A3Q8WWT9 602 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 CTRCQ99895 268 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 MS4A8Q9BY19 250 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 NLNQ9BYT8 704 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 C20orf27Q9GZN8 174 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 AICDAQ9GZX7 198 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 SPRTNQ9H040 489 aaPredicted RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 BRF2Q9HAW0 419 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 MID1IP1Q9NPA3 183 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 DMRT3Q9NQL9 472 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 INTS9Q9NV88 658 aaKnown RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 FOXJ2Q9P0K8 574 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 SNX6Q9UNH7 406 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 SLC22A7Q9Y694 548 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 MDC1Q14676 2089 aaKnown RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 NCOR2Q9Y618 2525 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 A0A1B0GX78 115 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 WDR91A4D1P6 747 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 TRABD2BA6NFA1 517 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 ANKDD1BA6NHY2 528 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 NPIPB8E9PQR5 432 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 ZNF749O43361 778 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 BRINP1O60477 761 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 MED26O95402 600 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 KRT6AP02538 564 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 KRT6BP04259 564 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 SMIM10L1P0DMW3 83 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 UROSP10746 265 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 SPINK2P20155 84 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 HNRNPH1P31943 449 aaKnown RBP12.09□□□□□ -0.47
MKS1-206ENST00000577824 TSFMP43897 325 aaKnown RBP12.09□□□□□ -0.47
MKS1-206ENST00000577824 KRT6CP48668 564 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 FOXA1P55317 472 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 PHEXP78562 749 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 RGS1Q08116 209 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 BST1Q10588 318 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 CSTF3Q12996 717 aaKnown RBP12.09□□□□□ -0.47
MKS1-206ENST00000577824 IFT88Q13099 833 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 CUL3Q13618 768 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 MUM1Q2TAK8 710 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 FAM214AQ32MH5 1076 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 ATG16L1Q676U5 607 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 NIPAL1Q6NVV3 410 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
MKS1-206ENST00000577824 TMEM126BQ8IUX1 230 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 CDYL2Q8N8U2 506 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 CKAP2Q8WWK9 683 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 GATA6Q92908 595 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 SMIM10Q96HG1 83 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 ZNF578Q96N58 590 aaPredicted RBP12.09□□□□□ -0.47
MKS1-206ENST00000577824 GBP5Q96PP8 586 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 KCNA7Q96RP8 456 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
MKS1-206ENST00000577824 ULBP3Q9BZM4 244 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 THSD1Q9NS62 852 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 CUTCQ9NTM9 273 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 FAM53CQ9NYF3 392 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 ANGPTL2Q9UKU9 493 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 RAP2CQ9Y3L5 183 aa12.09□□□□□ -0.47
MKS1-206ENST00000577824 DMXL2Q8TDJ6 3036 aa12.08□□□□□ -0.47
MKS1-206ENST00000577824 HYKKA2RU49 373 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 LRIT2A6NDA9 550 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 URADA6NGE7 173 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 C4orf51C9J302 202 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 AGRPO00253 132 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 MANBAO00462 879 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 FFAR3O14843 346 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 DSCR3O14972 297 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 AZIN1O14977 448 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 GPR42O15529 346 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 ITM2AO43736 263 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 STK17BO94768 372 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 SEMA3DO95025 777 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 SCELO95171 688 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 NSA2O95478 260 aaKnown RBP12.08□□□□□ -0.48
MKS1-206ENST00000577824 ZNF28P17035 718 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 ITGAXP20702 1163 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 RBMS1P29558 406 aaKnown RBP12.08□□□□□ -0.48
MKS1-206ENST00000577824 SLC5A2P31639 672 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 ARL1P40616 181 aaPredicted RBP12.08□□□□□ -0.48
MKS1-206ENST00000577824 SLC1A6P48664 564 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 HTR6P50406 440 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 STXBP1P61764 594 aaKnown RBP12.08□□□□□ -0.48
MKS1-206ENST00000577824 SNRPNP63162 240 aaKnown RBP12.08□□□□□ -0.48
MKS1-206ENST00000577824 CYP4F2P78329 520 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 STX3Q13277 289 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 HERC3Q15034 1050 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 TBC1D25Q3MII6 688 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 UGT3A2Q3SY77 523 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 TMEM35AQ53FP2 167 aa12.08□□□□□ -0.48
MKS1-206ENST00000577824 PRAMEF17Q5VTA0 474 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms