RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PARP16Q8N5Y8 322 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 MOSPD2Q8NHP6 518 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 MMP28Q9H239 520 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 EXTL2Q9UBQ6 330 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PRKAG2Q9UGJ0 569 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 OR7A10O76100 309 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 GABRB3P28472 473 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 LCN1P31025 176 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CRISP3P54108 245 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CDH11P55287 796 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 OXA1LQ15070 435 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 OAFQ86UD1 273 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CHPFQ8IZ52 775 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 Q8N9G6 341 aaPredicted RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 DENND6BQ8NEG7 585 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 SETD6Q8TBK2 473 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC9A6Q92581 669 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PPIL3Q9H2H8 161 aaKnown RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 RNF121Q9H920 327 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 BEX1Q9HBH7 125 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PCDHA9Q9Y5H5 950 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CACNA1SQ13698 1873 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 MEIOCA2RUB1 952 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 ARNTLO00327 626 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF195O14628 629 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PRMT3O60678 531 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 HMGN1P05114 100 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF10P21506 573 aaPredicted RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 APLP1P51693 650 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CRISP1P54107 249 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 DUS1LQ6P1R4 473 aaKnown RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CEACAM20Q6UY09 585 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 MAELQ96JY0 434 aaKnown RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 C1orf74Q96LT6 269 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CCDC3Q9BQI4 270 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 FUZQ9BT04 418 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 UBQLN2Q9UHD9 624 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 TBC1D24Q9ULP9 559 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 STUB1Q9UNE7 303 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PDYNP01213 254 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PLA2G4EQ3MJ16 856 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PM20D1Q6GTS8 502 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 B3GNT8Q7Z7M8 397 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CFAP206Q8IYR0 622 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CADM2Q8N3J6 435 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 GDPD1Q8N9F7 314 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 OR4K1Q8NGD4 311 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CAMK1GQ96NX5 476 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 LMAN2LQ9H0V9 348 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 ELAC1Q9H777 363 aaKnown RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 CBSLP0DN79 551 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 CELP19835 753 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 CBSP35520 551 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 POLR2IP36954 125 aaKnown RBP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SOX4Q06945 474 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 BIKQ13323 160 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SF3B4Q15427 424 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 NDUFA9Q16795 377 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 BCL7AQ4VC05 210 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 LETMD1Q6P1Q0 360 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF438Q7Z4V0 828 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 ASB15Q8WXK1 588 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SIAEQ9HAT2 523 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZCCHC3Q9NUD5 404 aaKnown RBP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 HMX3A6NHT5 357 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC9A3R1O14745 358 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 C6orf47O95873 294 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 DNASE1P24855 282 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 KCNQ1P51787 676 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 TSPAN5P62079 268 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 FAM189BP81408 668 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF648Q5T619 568 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 MEDAGQ5VYS4 303 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 PSAPL1Q6NUJ1 521 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 NCEH1Q6PIU2 408 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 FAM217AQ8IXS0 508 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 LINC00471Q8N535 108 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC5A8Q8N695 610 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 PJA1Q8NG27 643 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 OR8J1Q8NGP2 316 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SOCS4Q8WXH5 440 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SNAPC3Q92966 411 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 ISL2Q96A47 359 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 RFT1Q96AA3 541 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 TREX1Q9NSU2 369 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 DUS2Q9NX74 493 aaKnown RBP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 USP22Q9UPT9 525 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 A0A0G2JPF8 293 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 HNRNPCL3B7ZW38 293 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 HNRNPCL4P0DMR1 293 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 AP2S1P53680 142 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 CREMQ03060 361 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 FPGSQ05932 587 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLBPQ14493 270 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 USP41Q3LFD5 358 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 PELI3Q8N2H9 469 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms