RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RERGQ96A58 199 aaPredicted RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 CABS1Q96KC9 395 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 PRAP1Q96NZ9 151 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 OR2A5Q96R48 311 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 ERP44Q9BS26 406 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 NUDT9Q9BW91 350 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 TRIM54Q9BYV2 358 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 PCBD2Q9H0N5 130 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 ATG10Q9H0Y0 220 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 WDR54Q9H977 334 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 CCDC177Q9NQR7 707 aaPredicted RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 P4HTMQ9NXG6 502 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 GPR83Q9NYM4 423 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 MOCS1Q9NZB8 636 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 SLC17A6Q9P2U8 582 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 REV1Q9UBZ9 1251 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 ADAM30Q9UKF2 790 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 NXT1Q9UKK6 140 aaKnown RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 CORO1CQ9ULV4 474 aaPredicted RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 RUVBL1Q9Y265 456 aaKnown RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.08□□□□□ -1.28
NUP88-205ENST00000572809 MAU2Q9Y6X3 613 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 TLN1Q9Y490 2541 aaKnown RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 CCDC88CQ9P219 2028 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 KCNE1BA0A087WTH5 132 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 SLC22A31A6NKX4 558 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 VSTM2BA6NLU5 285 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 E7ESA3 106 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 DPM1O60762 260 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 PGRP06401 933 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 SAT1P21673 171 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 FDXRP22570 491 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 MMP11P24347 488 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 CCND1P24385 295 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 PGGT1BP53609 377 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 MLLT10P55197 1068 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 GP2P55259 537 aaKnown RBP7.07□□□□□ -1.28
NUP88-205ENST00000572809 SOX8P57073 446 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 ETF1P62495 437 aaKnown RBP7.07□□□□□ -1.28
NUP88-205ENST00000572809 ID3Q02535 119 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 MGAT5Q09328 741 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 CALCOCO2Q13137 446 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 SP140Q13342 867 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 NAE1Q13564 534 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 RAPSNQ13702 412 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 HKDC1Q2TB90 917 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 PRTGQ2VWP7 1150 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 NADK2Q4G0N4 442 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 VWA2Q5GFL6 755 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 TMEM201Q5SNT2 666 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 GARNL3Q5VVW2 1013 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 SYT10Q6XYQ8 523 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 SHISA6Q6ZSJ9 500 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 PPP1R32Q7Z5V6 425 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 STRA8Q7Z7C7 330 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 PLD3Q8IV08 490 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 ZBED8Q8IZ13 594 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 GALNT16Q8N428 558 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 CSNK1A1LQ8N752 337 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 STT3BQ8TCJ2 826 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 PYROXD1Q8WU10 500 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 MIEF2Q96C03 454 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 MVB12AQ96EY5 273 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 LINGO1Q96FE5 620 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 PDLIM5Q96HC4 596 aaKnown RBP7.07□□□□□ -1.28
NUP88-205ENST00000572809 VPS50Q96JG6 964 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 SMAD5Q99717 465 aaKnown RBP7.07□□□□□ -1.28
NUP88-205ENST00000572809 WDR83Q9BRX9 315 aaKnown RBP7.07□□□□□ -1.28
NUP88-205ENST00000572809 YIPF2Q9BWQ6 316 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 WNT10AQ9GZT5 417 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 DPH5Q9H2P9 285 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 SEMA3GQ9NS98 782 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 ARL15Q9NXU5 204 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 WHRNQ9P202 907 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 C5AR2Q9P296 337 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 ZNF282Q9UDV7 671 aaPredicted RBP7.07□□□□□ -1.28
NUP88-205ENST00000572809 CDC23Q9UJX2 597 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 CORINQ9Y5Q5 1042 aa7.07□□□□□ -1.28
NUP88-205ENST00000572809 MED13Q9UHV7 2174 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 IGLV3-12A0A075B6K2 115 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 PRAMEF27A3QJZ7 478 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 PABPN1LA6NDY0 278 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 MASP2O00187 686 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 SOCS6O14544 535 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 HAT1O14929 419 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 EIF3HO15372 352 aaKnown RBP eCLIP7.06□□□□□ -1.28
NUP88-205ENST00000572809 PRPF4O43172 522 aaKnown RBP eCLIP7.06□□□□□ -1.28
NUP88-205ENST00000572809 RAD51CO43502 376 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 ALX3O95076 343 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 GUCA1CO95843 209 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 TSPAN12O95859 305 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 ZGLP1P0C6A0 271 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 NPPBP16860 134 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 FBLP22087 321 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 ITGA3P26006 1051 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 SLC26A3P40879 764 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 AP1S2P56377 157 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 RPS15AP62244 130 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 TBPL1P62380 186 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 CSNK1G2P78368 415 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms