RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LHCGRP22888 699 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 SERPINA4P29622 427 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 STK19P49842 368 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-205ENST00000571272 UGT2B15P54855 530 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 COPZ1P61923 177 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 SELENOWP63302 87 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 PRKCDQ05655 676 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 ARL14EPQ8N8R7 260 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-205ENST00000571272 GTPBP3Q969Y2 492 aaKnown RBP16.82■□□□□ 0.28
SCARF1-205ENST00000571272 MED8Q96G25 268 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 NUAK2Q9H093 628 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 CHST8Q9H2A9 424 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 TP63Q9H3D4 680 aaPredicted RBP16.82■□□□□ 0.28
SCARF1-205ENST00000571272 ERVK13-1Q9NX77 482 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 EHD3Q9NZN3 535 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 LRFN2Q9ULH4 789 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 RUVBL1Q9Y265 456 aaKnown RBP16.82■□□□□ 0.28
SCARF1-205ENST00000571272 PCDHGA3Q9Y5H0 932 aa16.82■□□□□ 0.28
SCARF1-205ENST00000571272 MANSC4A6NHS7 340 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-205ENST00000571272 TBKBP1A7MCY6 615 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 SCAMP2O15127 329 aaKnown RBP16.81■□□□□ 0.28
SCARF1-205ENST00000571272 AOC2O75106 756 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 ZNF821O75541 412 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-205ENST00000571272 ADRA2AP08913 450 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 ANXA4P09525 319 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-205ENST00000571272 CYP2A7P20853 494 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 ACLYP53396 1101 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 PRKCZQ05513 592 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 ELAVL2Q12926 359 aaKnown RBP16.81■□□□□ 0.28
SCARF1-205ENST00000571272 DOC2AQ14183 400 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 RSBN1Q5VWQ0 802 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-205ENST00000571272 HS6ST3Q8IZP7 471 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 CPA6Q8N4T0 437 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 PCSK9Q8NBP7 692 aaKnown RBP16.81■□□□□ 0.28
SCARF1-205ENST00000571272 C11orf65Q8NCR3 313 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 OR4K1Q8NGD4 311 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 OVCA2Q8WZ82 227 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 ZNF486Q96H40 463 aaPredicted RBP16.81■□□□□ 0.28
SCARF1-205ENST00000571272 SLX1AQ9BQ83 275 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 CLSTN3Q9BQT9 956 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 FKBP14Q9NWM8 211 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 TMPRSS11EQ9UL52 423 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 C1orf226A1L170 272 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 ADAMDEC1O15204 470 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 KIAA0513O60268 411 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 PRMT3O60678 531 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 CCNKO75909 580 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 SPANXN2Q5MJ10 180 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 SLC8B1Q6J4K2 584 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 TTC23LQ6PF05 361 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 NPAS3Q8IXF0 933 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 B3GNT7Q8NFL0 401 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 OR4A15Q8NGL6 344 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 FCRL1Q96LA6 429 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 NEK6Q9HC98 313 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 OGDHLQ9ULD0 1010 aa16.81■□□□□ 0.28
SCARF1-205ENST00000571272 NPIPB8E9PQR5 432 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 SOCS5O75159 536 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 IGSF6O95976 241 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 ZNF24P17028 368 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 CSTF3Q12996 717 aaKnown RBP16.8■□□□□ 0.28
SCARF1-205ENST00000571272 TPRG1Q6ZUI0 275 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 VPS37AQ8NEZ2 397 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 WDR20Q8TBZ3 569 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 TCF25Q9BQ70 676 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 PEX16Q9Y5Y5 336 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 NINQ8N4C6 2090 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 TET1Q8NFU7 2136 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 GNG14A0A1W2PPG7 69 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 PRAMEF25A6NGN4 478 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 GBAP04062 536 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 CTSOP43234 321 aaPredicted RBP16.8■□□□□ 0.28
SCARF1-205ENST00000571272 TSTQ16762 297 aaKnown RBP16.8■□□□□ 0.28
SCARF1-205ENST00000571272 MLIPQ5VWP3 458 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 TXNDC8Q6A555 127 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 HOMEZQ8IX15 550 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 GPATCH2Q9NW75 528 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 CCDC59Q9P031 241 aaKnown RBP16.8■□□□□ 0.28
SCARF1-205ENST00000571272 A3GALT2U3KPV4 340 aa16.8■□□□□ 0.28
SCARF1-205ENST00000571272 MGAT4DA6NG13 374 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 GFYI3L273 518 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 GABRB1P18505 474 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 GJA8P48165 433 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 NKX3-2P78367 333 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 RAE1P78406 368 aaKnown RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 NAE1Q13564 534 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 DOC2BQ14184 412 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 GANABQ14697 944 aaKnown RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 FBXO43Q4G163 708 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 ZNF648Q5T619 568 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 KIAA1841Q6NSI8 718 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 THOC6Q86W42 341 aaKnown RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 ADAMTS19Q8TE59 1207 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 SCRN2Q96FV2 425 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 TSEN34Q9BSV6 310 aaKnown RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 CEP44Q9C0F1 390 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 POFUT2Q9Y2G5 429 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 CFAP20Q9Y6A4 193 aaKnown RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 PCDH17O14917 1159 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms