RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 YIPF2Q9BWQ6 316 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 ANKHQ9HCJ1 492 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 ATP13A2Q9NQ11 1180 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 DNAJC11Q9NVH1 559 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 NUDT4Q9NZJ9 180 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 ZNF180Q9UJW8 692 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 C3orf18Q9UK00 162 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 G3BP2Q9UN86 482 aaKnown RBP12.01□□□□□ -0.49
TVP23B-204ENST00000571018 PCDHGB7Q9Y5F8 929 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 ANKRD12Q6UB98 2062 aa12.01□□□□□ -0.49
TVP23B-204ENST00000571018 A6NL46 340 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 IDSB3KWA1 339 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 PCDH17O14917 1159 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 SLC28A2O43868 658 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 KLHL2O95198 593 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 S100BP04271 92 aaPredicted RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 ABHD2P08910 425 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 MTHFD2P13995 350 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 CNTFP26441 200 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 VARSP26640 1264 aaKnown RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 MSH2P43246 934 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 MAGEA12P43365 314 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 EMP2P54851 167 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 RGS1Q08116 209 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 KLRB1Q12918 225 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 AIMP2Q13155 320 aaKnown RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 HERC3Q15034 1050 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 ACAP2Q15057 778 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 RBBP5Q15291 538 aaKnown RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 FBXO48Q5FWF7 155 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 ATG14Q6ZNE5 492 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 TRMT10CQ7L0Y3 403 aaKnown RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 PRICKLE2Q7Z3G6 844 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 PDSS2Q86YH6 399 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 ZC3H7AQ8IWR0 971 aaKnown RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 GALNT16Q8N428 558 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 AFAP1L2Q8N4X5 818 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 LRRN4CLQ8ND94 238 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 TRPV3Q8NET8 790 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 OR11G2Q8NGC1 345 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 OR51Q1Q8NH59 317 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 UHMK1Q8TAS1 419 aaKnown RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 ZCCHC10Q8TBK6 192 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 EXT2Q93063 718 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 SMAD5Q99717 465 aaKnown RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 NUDT9Q9BW91 350 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 CD244Q9BZW8 370 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 SLC6A16Q9GZN6 736 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 PITHD1Q9GZP4 211 aaPredicted RBP12□□□□□ -0.49
TVP23B-204ENST00000571018 EHD1Q9H4M9 534 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 NT5DC2Q9H857 520 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 GPR83Q9NYM4 423 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 COPG2Q9UBF2 871 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 FBXL4Q9UKA2 621 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 NAALAD2Q9Y3Q0 740 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 IKBKGQ9Y6K9 419 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 COL6A6A6NMZ7 2263 aa12□□□□□ -0.49
TVP23B-204ENST00000571018 CCDC88CQ9P219 2028 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 A0A1W2PQ72 361 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 URADA6NGE7 173 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 SYCE1LA8MT33 242 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 SUPT3HB4E1H0 165 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 POC1B-GALNT4F8VUJ3 575 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 SGK494L7N484 410 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 UBXN8O00124 270 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 MASP2O00187 686 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 MAP2K7O14733 419 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 CLGNO14967 610 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 KLHL41O60662 606 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 GALR3O60755 368 aaPredicted RBP11.99□□□□□ -0.49
TVP23B-204ENST00000571018 PRAMEF4O60810 478 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 SUPT3HO75486 399 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 KRT38O76015 456 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 KLHL18O94889 574 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 BMP10O95393 424 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 SERPIND1P05546 499 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 SERPINA6P08185 405 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 FAM153BP0C7A2 387 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 ALOX12P18054 663 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 EPORP19235 508 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 GSTM2P28161 218 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 HYAL2Q12891 473 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 SLBPQ14493 270 aaKnown RBP eCLIP11.99□□□□□ -0.49
TVP23B-204ENST00000571018 MYBPC3Q14896 1274 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 PDK4Q16654 411 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 TUBB8Q3ZCM7 444 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 FAM153CQ494X1 144 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 PRAMEF9Q5VWM5 478 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 NIPAL1Q6NVV3 410 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 TMIGD1Q6UXZ0 262 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 TAOK1Q7L7X3 1001 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 LRRC70Q7Z2Q7 622 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 HPS6Q86YV9 775 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 EIF1ADQ8N9N8 165 aaKnown RBP11.99□□□□□ -0.49
TVP23B-204ENST00000571018 TEX19Q8NA77 164 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 TTLQ8NG68 377 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 CREB3L4Q8TEY5 395 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 UBTD2Q8WUN7 234 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 DCAKDQ8WVC6 231 aa11.99□□□□□ -0.49
TVP23B-204ENST00000571018 RNF166Q96A37 237 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms