RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CCDC130P13994 396 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 MYOD1P15172 320 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 ITGA2P17301 1181 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 GJA1P17302 382 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 CD53P19397 219 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 ADORA2BP29275 332 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 GDI1P31150 447 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 ATP5C1P36542 298 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 CCR2P41597 374 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 MAGEA9P43362 315 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 HARS2P49590 506 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 MAP3K7CLP57077 242 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 STARD6P59095 220 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 OLR1P78380 273 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 FCHO2Q0JRZ9 810 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 LRMPQ12912 555 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 TAF10Q12962 218 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 PDGFRLQ15198 375 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 RBBP5Q15291 538 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 MLF2Q15773 248 aaPredicted RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 EXOC3L4Q17RC7 722 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 ITPRIPL2Q3MIP1 535 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 DPCR1Q3MIW9 517 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 TCP11X2Q5H9J9 407 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 HECTD3Q5T447 861 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 SDHAF4Q5VUM1 108 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 SNX30Q5VWJ9 437 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 TRIM65Q6PJ69 517 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 TMEM270Q6UE05 265 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 VITQ6UXI7 678 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 RBM43Q6ZSC3 357 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 DSG4Q86SJ6 1040 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 RALGPS2Q86X27 583 aaPredicted RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 SIX6OS1Q8N1H7 587 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 C12orf29Q8N999 325 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 ANKRD52Q8NB46 1076 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 SLC4A11Q8NBS3 891 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 NAXEQ8NCW5 288 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 BBS10Q8TAM1 723 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 THAP6Q8TBB0 222 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 RFFLQ8WZ73 363 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 FAM3CQ92520 227 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 PIGTQ969N2 578 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 TAAR8Q969N4 342 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 FBXO32Q969P5 355 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 RHBDF1Q96CC6 855 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 GRAMD2BQ96HH9 432 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 CNOT6LQ96LI5 555 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 UHRF2Q96PU4 802 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 PIP5K1AQ99755 562 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 CMKLR1Q99788 373 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 TUBGCP2Q9BSJ2 902 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 RPP25Q9BUL9 199 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 SDCBP2Q9H190 292 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 C8orf33Q9H7E9 229 aaPredicted RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 FKRPQ9H9S5 495 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 SCPEP1Q9HB40 452 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 APOBEC3GQ9HC16 384 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 ZNF334Q9HCZ1 680 aaPredicted RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 UBE2TQ9NPD8 197 aaPredicted RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 ACSS1Q9NUB1 689 aaPredicted RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 ABCF3Q9NUQ8 709 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 FAM49BQ9NUQ9 324 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 GCNT4Q9P109 453 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 DLGAP2Q9P1A6 1054 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 CHORDC1Q9UHD1 332 aaPredicted RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 RALYQ9UKM9 306 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 SCML2Q9UQR0 700 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 TRIOO75962 3097 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 ANK1P16157 1881 aa3.84□□□□□ -1.8
NUP88-202ENST00000570937 PLXNA3P51805 1871 aa3.84□□□□□ -1.8
NUP88-202ENST00000570937 VWA8A3KMH1 1905 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 SCN1AP35498 2009 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 BRWD1Q9NSI6 2320 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 A0A1W2PPH5 198 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 FAM92AA1XBS5 289 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 EIF3CLB5ME19 914 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 CLDN5O00501 218 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 XPO1O14980 1071 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 TMEM63AO94886 807 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 EGFP01133 1207 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 CCDC172P0C7W6 258 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 AOC1P19801 751 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 FCARP24071 287 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 KRT9P35527 623 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 ACADSBP45954 432 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 IFNAR2P48551 515 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 EEF1A1P68104 462 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 SLC7A9P82251 487 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 COG7P83436 770 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 MYL5Q02045 173 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 BST2Q10589 180 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 RUNX3Q13761 415 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 MTF1Q14872 753 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 E2F5Q15329 346 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 GOLGA7BQ2TAP0 167 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 KLHL40Q2TBA0 621 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 ALFQ53S48 1182 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms