RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 GK5Q6ZS86 529 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 MAATS1Q7Z4T9 603 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 ZNF227Q86WZ6 799 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 LIX1LQ8IVB5 337 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 CCDC50Q8IVM0 306 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 KLHDC8BQ8IXV7 354 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 OR4L1Q8NH43 312 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 GORASP1Q9BQQ3 440 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 ATG10Q9H0Y0 220 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 HCN3Q9P1Z3 774 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 ZNF629Q9UEG4 869 aaPredicted RBP8.1□□□□□ -1.11
SMG1-216ENST00000569122 RIMKLBQ9ULI2 386 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 ERVK-11Q9UQG0 969 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 FBN1P35555 2871 aaKnown RBP8.1□□□□□ -1.11
SMG1-216ENST00000569122 hCG_1818297A0A087WSY0 165 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 CLCA1A8K7I4 914 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 A8MVJ9 347 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 SGK494L7N484 410 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 PFDN6O15212 129 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 NRP2O60462 931 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 HCN1O60741 890 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 CRLF1O75462 422 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 TPH1P17752 444 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 COMTP21964 271 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 TACR1P25103 407 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 ATP5DP30049 168 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 CETN2P41208 172 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 BDKRB1P46663 353 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 MAN2A2P49641 1150 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 SSR4P51571 173 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 CLCN2P51788 898 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 PNLIPRP1P54315 467 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 GPR85P60893 370 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 COPS2P61201 443 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 PRAMEP78395 509 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 SORDQ00796 357 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 TSTA3Q13630 321 aaPredicted RBP8.09□□□□□ -1.11
SMG1-216ENST00000569122 SPARCL1Q14515 664 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 SLC10A1Q14973 349 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 HERC3Q15034 1050 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 P3H1Q32P28 736 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 Q5PR19 223 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 TMEM214Q6NUQ4 689 aaKnown RBP8.09□□□□□ -1.11
SMG1-216ENST00000569122 SUSD1Q6UWL2 747 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 BBS12Q6ZW61 710 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 TRILQ7L0X0 811 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 KATNAL2Q8IYT4 538 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 CYP4X1Q8N118 509 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 FAM109AQ8N4B1 249 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 KIF2BQ8N4N8 673 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 GPATCH11Q8N954 259 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 OR6P1Q8NGX9 317 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 PEX13Q92968 403 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 TBC1D20Q96BZ9 403 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 NAP1L5Q96NT1 182 aaPredicted RBP8.09□□□□□ -1.11
SMG1-216ENST00000569122 BPIFA3Q9BQP9 254 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 CCDC77Q9BR77 488 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 LDAHQ9H6V9 325 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 CLK4Q9HAZ1 481 aaKnown RBP8.09□□□□□ -1.11
SMG1-216ENST00000569122 TMEM184CQ9NVA4 438 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 HPF1Q9NWY4 346 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 ALKBH4Q9NXW9 302 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 TAC3Q9UHF0 121 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 NENFQ9UMX5 172 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 EFR3BQ9Y2G0 817 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 YARS2Q9Y2Z4 477 aaKnown RBP8.09□□□□□ -1.11
SMG1-216ENST00000569122 PCDHA3Q9Y5H8 950 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 FAM215AQ9Y5M1 114 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 SLC22A7Q9Y694 548 aa8.09□□□□□ -1.11
SMG1-216ENST00000569122 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.09□□□□□ -1.11
SMG1-216ENST00000569122 IGKV1-8A0A0C4DH67 115 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 FEZF1A0PJY2 475 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 SYNDIG1LA6NDD5 238 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 OR51F1A6NGY5 319 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 SAGE2PA6NJ88 616 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 IQCF5A8MTL0 148 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 ARHGEF33A8MVX0 844 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 H3BMM5 538 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 MYO1CO00159 1063 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 HAT1O14929 419 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 SMAD7O15105 426 aaKnown RBP8.08□□□□□ -1.12
SMG1-216ENST00000569122 P2RX6O15547 441 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 AKR1B10O60218 316 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 ITGA10O75578 1167 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 CDC123O75794 336 aaPredicted RBP8.08□□□□□ -1.12
SMG1-216ENST00000569122 MATN4O95460 622 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 GOT2P00505 430 aaKnown RBP8.08□□□□□ -1.12
SMG1-216ENST00000569122 CATP04040 527 aaKnown RBP8.08□□□□□ -1.12
SMG1-216ENST00000569122 FHP07954 510 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 SLC35G6P0C7Q6 338 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 RBP3P10745 1247 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 IL1RNP18510 177 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 BMP5P22003 454 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 GRK3P35626 688 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 ADH7P40394 386 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 EIF3EP60228 445 aaKnown RBP8.08□□□□□ -1.12
SMG1-216ENST00000569122 SNTB1Q13884 538 aaKnown RBP8.08□□□□□ -1.12
SMG1-216ENST00000569122 THEMIS2Q5TEJ8 643 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 RTL6Q6ICC9 239 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 KRTAP1-3Q8IUG1 177 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms