RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SLC35F4A4IF30 521 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 C9P02748 559 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CSF2P04141 144 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ZDHHC11BP0C7U3 371 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 PRPS2P11908 318 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 AP1S1P61966 158 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 PTSQ03393 145 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CNTN1Q12860 1018 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CCDC92Q53HC0 331 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 UBE2UQ5VVX9 321 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ALG1LQ6GMV1 187 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 TRIM46Q7Z4K8 759 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ADCK2Q7Z695 626 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 AQP11Q8NBQ7 271 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 PHF10Q8WUB8 498 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 APH1BQ8WW43 257 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ATL1Q8WXF7 558 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 S100ZQ8WXG8 99 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 USP7Q93009 1102 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ZFYVE19Q96K21 471 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF300Q96RE9 604 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 KLF16Q9BXK1 252 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CEP44Q9C0F1 390 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 NDEL1Q9GZM8 345 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 EHD1Q9H4M9 534 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 DNMT3BQ9UBC3 853 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CCL26Q9Y258 94 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 PCDHGA6Q9Y5G7 932 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 DOCK4Q8N1I0 1966 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 ARHGEF33A8MVX0 844 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 LOC110117498-PIK3R3F6TDL0 507 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 KLK1P06870 262 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 TNNI3P19429 210 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 MAGEA8P43361 318 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 C2orf80Q0P641 193 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 PPIGQ13427 754 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 ACOX1Q15067 660 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 PLEKHG6Q3KR16 790 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF385BQ569K4 471 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 KDM4DQ6B0I6 523 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 PTCHD4Q6ZW05 846 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 SHFQ7M4L6 423 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 NPAS4Q8IUM7 802 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 HUS1BQ8NHY5 278 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 GGHQ92820 318 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 FAM129BQ96TA1 746 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 YIPF4Q9BSR8 244 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 NTMT1Q9BV86 223 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 SLIRPQ9GZT3 109 aaKnown RBP8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 SUV39H2Q9H5I1 410 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 RIMKLBQ9ULI2 386 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 PRR23AA6NEV1 266 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 ANKDD1BA6NHY2 528 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 KPNA3O00505 521 aaPredicted RBP8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 CCL16O15467 120 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 FZD6O60353 706 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 CCNKO75909 580 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 URODP06132 367 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 SELPP16109 830 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 PRPS1L1P21108 318 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 SDHBP21912 280 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 HBA1P69905 142 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 HSPB3Q12988 150 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 SELENBP1Q13228 472 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 MRPL58Q14197 206 aaKnown RBP8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 SPDYE7PQ495Y7 208 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 ZMAT1Q5H9K5 638 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF362Q5T0B9 420 aaPredicted RBP8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 AGTRAPQ6RW13 159 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 CCBE1Q6UXH8 406 aaPredicted RBP8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 HSD11B1LQ7Z5J1 315 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 CFAP206Q8IYR0 622 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 CAMKK1Q8N5S9 505 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 ZFP41Q8N8Y5 198 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 DCAF4L2Q8NA75 395 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 VPS37AQ8NEZ2 397 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 WDR48Q8TAF3 677 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 UBASH3BQ8TF42 649 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 SLC38A4Q969I6 547 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 YIPF6Q96EC8 236 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 CMTM7Q96FZ5 175 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 NECTIN4Q96NY8 510 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 VN1R3Q9BXE9 311 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 HCFC1R1Q9NWW0 138 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 QPCTLQ9NXS2 382 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 MYOFQ9NZM1 2061 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 PATJQ8NI35 1801 aa8.63□□□□□ -1.03
HDGFL3-206ENST00000568294 M0R082 166 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SLC16A6O15403 523 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 KIAA0513O60268 411 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 KRT8P05787 483 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 PABPC1P11940 636 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SRCP12931 536 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 ATP1B2P14415 290 aaPredicted RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 HLA-FP30511 346 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 RYKP34925 604 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 EPHB3P54753 998 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SNRPD1P62314 119 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CBX2Q14781 532 aaPredicted RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SPATS1Q496A3 300 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms