RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ITGB2P05107 769 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 SLC35G6P0C7Q6 338 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 EPB42P16452 691 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 KRT15P19012 456 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 EEF1DP29692 281 aaKnown RBP12.34□□□□□ -0.43
CNOT1-213ENST00000568158 FOLR3P41439 243 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 CASP2P42575 452 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 AVPR1BP47901 424 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 PWP1Q13610 501 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 ADNP2Q6IQ32 1131 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 EMBQ6PCB8 327 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 BORAQ6PGQ7 559 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 GOLGA7Q7Z5G4 137 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 PDSS2Q86YH6 399 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.34□□□□□ -0.43
CNOT1-213ENST00000568158 KRT78Q8N1N4 520 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 TRPV3Q8NET8 790 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 OR2Y1Q8NGV0 311 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 ACMSDQ8TDX5 336 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 CCT6BQ92526 530 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 FKBP10Q96AY3 582 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 MIEF2Q96C03 454 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 WDR34Q96EX3 536 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 MVB12AQ96EY5 273 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 PTCD3Q96EY7 689 aaKnown RBP12.34□□□□□ -0.43
CNOT1-213ENST00000568158 SPSB2Q99619 263 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 SLC26A1Q9H2B4 701 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 MRPL46Q9H2W6 279 aaKnown RBP12.34□□□□□ -0.43
CNOT1-213ENST00000568158 ANKHQ9HCJ1 492 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 ACSS2Q9NR19 701 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 TRPC4Q9UBN4 977 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 ZNF282Q9UDV7 671 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-213ENST00000568158 POLHQ9Y253 713 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 PADI2Q9Y2J8 665 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 PCSK5Q92824 1860 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 ANKDD1BA6NHY2 528 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 ARGFXA6NJG6 315 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 MASP2O00187 686 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 ATXN7O15265 892 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 NSA2O95478 260 aaKnown RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 NUDT17P0C025 328 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 ZGLP1P0C6A0 271 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 FAM87AP0C7U9 286 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 ZNF888P0CJ79 500 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 SMIM10L1P0DMW3 83 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 CCR10P46092 362 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 RAB8AP61006 207 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 OCA2Q04671 838 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 KLC1Q07866 573 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 RGS1Q08116 209 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 CHAF1BQ13112 559 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 GTF2H2Q13888 395 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 DSG2Q14126 1118 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 TBCCQ15814 346 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 HIST2H2ACQ16777 129 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 TOR1AIP1Q5JTV8 583 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 HIST2H2AA3Q6FI13 130 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 GTF2H2CQ6P1K8 395 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 RPS27LQ71UM5 84 aaKnown RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 VN1R5Q7Z5H4 357 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 UTP15Q8TED0 518 aaKnown RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 APOBEC4Q8WW27 367 aaKnown RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 THAP4Q8WY91 577 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 ZBTB9Q96C00 473 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 SMIM10Q96HG1 83 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 NSUN5Q96P11 429 aaKnown RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 SEMA4CQ9C0C4 833 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 SLC6A16Q9GZN6 736 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 C12orf65Q9H3J6 166 aaKnown RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 EHD1Q9H4M9 534 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 IPPKQ9H8X2 491 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 COPG2Q9UBF2 871 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 DCDC2Q9UHG0 476 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 MAN2B2Q9Y2E5 1009 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 NAALAD2Q9Y3Q0 740 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 TNPO3Q9Y5L0 923 aaKnown RBP12.33□□□□□ -0.44
CNOT1-213ENST00000568158 SLC22A7Q9Y694 548 aa12.33□□□□□ -0.44
CNOT1-213ENST00000568158 IGLV3-12A0A075B6K2 115 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 A0A0G2JN53 185 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 OR2W5A6NFC9 320 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 ZNF860A6NHJ4 632 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 A8MT66 165 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 C4orf51C9J302 202 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 H0YIG0 161 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 E2F3O00716 465 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 DLX3O60479 287 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 CDH16O75309 829 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 RDH16O75452 317 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 JRKO75564 520 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 KLHL18O94889 574 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 TBX6O95947 436 aaPredicted RBP12.32□□□□□ -0.44
CNOT1-213ENST00000568158 SERPINA6P08185 405 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 ALOX12P18054 663 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 TSPAN8P19075 237 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 CCL11P51671 97 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 OLR1P78380 273 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 PCDH1Q08174 1060 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 IFFO1Q0D2I5 559 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 LAPTM5Q13571 262 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 ATP1A4Q13733 1029 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms