RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TSSK3Q96PN8 268 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 PKMYT1Q99640 499 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 CPPED1Q9BRF8 314 aaPredicted RBP15.71■□□□□ 0.11
LINC00554-201ENST00000564841 GABARAPL1Q9H0R8 117 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 REEP1Q9H902 201 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 TRAPPC4Q9Y296 219 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 TPPPO94811 219 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 TSPAN12O95859 305 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 EOMESO95936 686 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 TP53P04637 393 aaPredicted RBP15.71■□□□□ 0.11
LINC00554-201ENST00000564841 RPS3P23396 243 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC00554-201ENST00000564841 RPS5P46782 204 aaKnown RBP15.71■□□□□ 0.11
LINC00554-201ENST00000564841 CASP9P55211 416 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 UBE3AQ05086 875 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 SCN1BQ07699 218 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 GPNMBQ14956 572 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 POU4F3Q15319 338 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 C10orf120Q5SQS8 335 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 SMYD5Q6GMV2 418 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 CALHM3Q86XJ0 350 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 GALNT6Q8NCL4 622 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 GPR150Q8NGU9 434 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 PGAP3Q96FM1 320 aaPredicted RBP15.71■□□□□ 0.11
LINC00554-201ENST00000564841 SPON2Q9BUD6 331 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 GALNT9Q9HCQ5 603 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 SERHLQ9NQF3 203 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 ABCC13Q9NSE7 274 aa15.71■□□□□ 0.11
LINC00554-201ENST00000564841 CFAP20Q9Y6A4 193 aaKnown RBP15.71■□□□□ 0.11
LINC00554-201ENST00000564841 USP34Q70CQ2 3546 aa15.71■□□□□ 0.1
LINC00554-201ENST00000564841 ARHGEF15O94989 841 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 PRKACAP17612 351 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 HSPA7P48741 367 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 FAM26DQ5JW98 314 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 RDH10Q8IZV5 341 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 PAF1Q8N7H5 531 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 FLCNQ8NFG4 579 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 SETD6Q8TBK2 473 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 FBXO32Q969P5 355 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 SH3KBP1Q96B97 665 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 UROC1Q96N76 676 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 COL21A1Q96P44 957 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 PITX2Q99697 317 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 IPPKQ9H8X2 491 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 CLEC2DQ9UHP7 191 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 FNDC1Q4ZHG4 1894 aaPredicted RBP15.7■□□□□ 0.1
LINC00554-201ENST00000564841 NYNRINQ9P2P1 1898 aaKnown RBP15.7■□□□□ 0.1
LINC00554-201ENST00000564841 TRBV5-3A0A0A0MS03 114 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 PLD2O14939 933 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 SDHBP21912 280 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 TACR1P25103 407 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 DSC1Q08554 894 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 TAF10Q12962 218 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 C5orf22Q49AR2 442 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 CCDC149Q6ZUS6 474 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ZSWIM9Q86XI8 627 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 PIANPQ8IYJ0 282 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 RTL3Q8N8U3 475 aaKnown RBP15.7■□□□□ 0.1
LINC00554-201ENST00000564841 TMEM203Q969S6 136 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 RPRD1AQ96P16 312 aaPredicted RBP15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ZNF382Q96SR6 550 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ZNF556Q9HAH1 456 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 NLKQ9UBE8 527 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 DLGAP4Q9Y2H0 992 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 CCL27Q9Y4X3 112 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 A0A0D9SEW6 157 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ADAM12O43184 909 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 CYP17A1P05093 508 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 RPLP2P05387 115 aaKnown RBP15.7■□□□□ 0.1
LINC00554-201ENST00000564841 DDCP20711 480 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 CD72P21854 359 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ALAS2P22557 587 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 CAV3P56539 151 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ZMYND11Q15326 602 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ARTNQ5T4W7 220 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ZNF605Q86T29 641 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 WDR36Q8NI36 951 aaKnown RBP15.7■□□□□ 0.1
LINC00554-201ENST00000564841 ENKURQ8TC29 256 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 NIPSNAP1Q9BPW8 284 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 SCML1Q9UN30 329 aa15.7■□□□□ 0.1
LINC00554-201ENST00000564841 FAM220BPB1ANY3 271 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 TNFRSF10BO14763 440 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 ALPPP05187 535 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 NUDT7P0C024 238 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 CSTF2P33240 577 aaKnown RBP eCLIP15.69■□□□□ 0.1
LINC00554-201ENST00000564841 TAGLNQ01995 201 aaKnown RBP15.69■□□□□ 0.1
LINC00554-201ENST00000564841 QPRTQ15274 297 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 GPR19Q15760 415 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 PYDC2Q56P42 97 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
LINC00554-201ENST00000564841 OTOP2Q7RTS6 562 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 KCTD20Q7Z5Y7 419 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 SLC5A8Q8N695 610 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 CDKN2AIPNLQ96HQ2 116 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 DIRAS2Q96HU8 199 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 C1QTNF6Q9BXI9 259 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 NSUN3Q9H649 340 aaKnown RBP15.69■□□□□ 0.1
LINC00554-201ENST00000564841 TMEM161AQ9NX61 479 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 GRXCR2A6NFK2 248 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 MAN2A2P49641 1150 aa15.69■□□□□ 0.1
LINC00554-201ENST00000564841 PSPHP78330 225 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms