RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 MYBL2P10244 700 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 IMPA1P29218 277 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 ATP5DP30049 168 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 HOXC12P31275 282 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 CCNFP41002 786 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 AGTR2P50052 363 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 HLCSP50747 726 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 PNLIPRP1P54315 467 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 GPR85P60893 370 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 PPP2R2AP63151 447 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 PMPCAQ10713 525 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 CDH17Q12864 832 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 TYSND1Q2T9J0 566 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 CES4AQ5XG92 561 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 SEM1Q6ZVN7 128 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 SLC5A8Q8N695 610 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 LRRC57Q8N9N7 239 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 SPC24Q8NBT2 197 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 RELL2Q8NC24 303 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-204ENST00000563739 OR6P1Q8NGX9 317 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 ZCCHC10Q8TBK6 192 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 METTL21AQ8WXB1 218 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 RND1Q92730 232 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 TRIM44Q96DX7 344 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-204ENST00000563739 AICDAQ9GZX7 198 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 ZDHHC11Q9H8X9 412 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 ETNK1Q9HBU6 452 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 KCNJ16Q9NPI9 418 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 CHRAC1Q9NRG0 131 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 CATSPERZQ9NTU4 200 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 TRMT1Q9NXH9 659 aaKnown RBP9.68□□□□□ -0.86
SF3B3-204ENST00000563739 C19orf25Q9UFG5 118 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-204ENST00000563739 SAGE2PA6NJ88 616 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 GOLGA6L6A8MZA4 724 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 KDM4EB2RXH2 506 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 TGFBR3LH3BV60 316 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 H7BY64 318 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 TFECO14948 347 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 CD3EAPO15446 510 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 PEX1O43933 1283 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 CDC40O60508 579 aaKnown RBP eCLIP9.67□□□□□ -0.862e-6■□□□□ 10.6
SF3B3-204ENST00000563739 STK10O94804 968 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 ZWINTO95229 277 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 ENDOUP21128 410 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 ADRA1DP25100 572 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 NMBRP28336 390 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 RPA3P35244 121 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 AVPR1BP47901 424 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 CRADDP78560 199 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 ARHGAP19Q14CB8 494 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 NAA25Q14CX7 972 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 OASLQ15646 514 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 FASTKD1Q53R41 847 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 MFSD4BQ5TF39 518 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 PTRHD1Q6GMV3 140 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 POMZP3Q6PJE2 187 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 C16orf47Q6ZP98 133 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 BIVMQ86UB2 503 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 POGLUT1Q8NBL1 392 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 FAM98AQ8NCA5 519 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 ATG4AQ8WYN0 398 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 SLCO2A1Q92959 643 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 PEX11GQ96HA9 241 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 PWWP2AQ96N64 755 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 PRAP1Q96NZ9 151 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 LPAR4Q99677 370 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 SH3GL2Q99962 352 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 TTYH2Q9BSA4 534 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 POLDIP3Q9BY77 421 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 CLEC4MQ9H2X3 399 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 DMRT3Q9NQL9 472 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 CRIM1Q9NZV1 1036 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 CBLCQ9ULV8 474 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 REXO2Q9Y3B8 237 aaKnown RBP9.67□□□□□ -0.86
SF3B3-204ENST00000563739 DUSP10Q9Y6W6 482 aa9.67□□□□□ -0.86
SF3B3-204ENST00000563739 KCNE1BA0A087WTH5 132 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 SMAPO00193 183 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 PDE9AO76083 593 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 GLSO94925 669 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 CELA3AP09093 270 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 ETS1P14921 441 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 SKIV2L2P42285 1042 aaKnown RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 CYB561P49447 251 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 CLCN7P51798 805 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 GPR143P51810 404 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 EIF3BP55884 814 aaKnown RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 OR4D2P58180 307 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 OLR1P78380 273 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 BTG2P78543 158 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 NSDHLQ15738 373 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 KCTD19Q17RG1 926 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 KLHL38Q2WGJ6 581 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 P3H1Q32P28 736 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 ANKRD20A4Q4UJ75 823 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 CCDC181Q5TID7 509 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 TMEM211Q6ICI0 200 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 CYHR1Q6ZMK1 362 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 OTOAQ7RTW8 1153 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms