RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 OR2M4Q96R27 311 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 C1QTNF7Q9BXJ2 289 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ADGRE3Q9BY15 652 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ABCG4Q9H172 646 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 ASB8Q9H765 288 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 AKIRIN1Q9H9L7 192 aaPredicted RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 APMAPQ9HDC9 416 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 SERHLQ9NQF3 203 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 TRNAU1APQ9NX07 287 aaKnown RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 MARCH4Q9P2E8 410 aaPredicted RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 CIDEBQ9UHD4 219 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 SERTAD3Q9UJW9 196 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 RPL26L1Q9UNX3 145 aaKnown RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 DRG1Q9Y295 367 aaKnown RBP4.13□□□□□ -1.75
SPG11-211ENST00000558561 PCDHGA1Q9Y5H4 931 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 SEC16AO15027 2179 aa4.13□□□□□ -1.75
SPG11-211ENST00000558561 NBEAQ8NFP9 2946 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 MED13Q9UHV7 2174 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 ZNF106Q9H2Y7 1883 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 IGHV1OR21-1A0A087WYE8 117 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 IGHV5-10-1A0A0J9YXX1 117 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 GLYATL1P3A0A0U1RQE8 302 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 RGSL1A5PLK6 1076 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 AGAP14A8MT82 685 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 GOLGA8MH3BSY2 632 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 YKT6O15498 198 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 PROM1O43490 865 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 HCRTR1O43613 425 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 ANXA9O76027 345 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 SRP72O76094 671 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 TRIM16O95361 564 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 IPO7O95373 1038 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 AP2A1O95782 977 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 GOT2P00505 430 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 KRT14P02533 472 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 IVDP26440 423 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 TEAD1P28347 426 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 ACTN2P35609 894 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 COILP38432 576 aaPredicted RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 SPAM1P38567 509 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 FOLR3P41439 243 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 MAPK9P45984 424 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 AVPR1BP47901 424 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 LEPRP48357 1165 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 PRIM2P49643 509 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 BLKP51451 505 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 ZNF140P52738 457 aaPredicted RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 CSE1LP55060 971 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 GFERP55789 205 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 LOXL3P58215 753 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 BLOC1S1P78537 153 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 E2F1Q01094 437 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 ZFP36L1Q07352 338 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 ELOCQ15369 112 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 TAF1AQ15573 450 aaPredicted RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 RPE65Q16518 533 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 PTCHD3Q3KNS1 767 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 ZNF658BQ4V348 819 aaPredicted RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 ZRANB3Q5FWF4 1079 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 PRAMEF17Q5VTA0 474 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 RGS7BPQ6MZT1 257 aaPredicted RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 CCDC70Q6NSX1 233 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 LVRNQ6Q4G3 990 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 TAS2R42Q7RTR8 314 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 KCTD20Q7Z5Y7 419 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 MRGPRGQ86SM5 289 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 CAND1Q86VP6 1230 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 SERPINA9Q86WD7 417 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 GALNT13Q8IUC8 556 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 KRT222Q8N1A0 295 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 FSTL5Q8N475 847 aaPredicted RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 C2orf73Q8N5S3 287 aaPredicted RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 ARL10Q8N8L6 244 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 NCSTNQ92542 709 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 MAGOHBQ96A72 148 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 RTP4Q96DX8 246 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 CAPZA3Q96KX2 299 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 VAT1Q99536 393 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 CTRCQ99895 268 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 GSDMCQ9BYG8 508 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 WWP1Q9H0M0 922 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 DDX47Q9H0S4 455 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 CARD9Q9H257 536 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 CHST8Q9H2A9 424 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 OSGEPL1Q9H4B0 414 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 XKR8Q9H6D3 395 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 CXorf36Q9H7Y0 433 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 PLAC1Q9HBJ0 212 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 ASCL3Q9NQ33 180 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 FOXJ2Q9P0K8 574 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 APPL1Q9UKG1 709 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 ITGB1BP2Q9UKP3 347 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 PACSIN3Q9UKS6 424 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 NDRG4Q9ULP0 352 aaKnown RBP4.12□□□□□ -1.75
SPG11-211ENST00000558561 AHCTF1Q8WYP5 2266 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 MGAQ8IWI9 3026 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 CFAP47Q6ZTR5 3102 aa4.12□□□□□ -1.75
SPG11-211ENST00000558561 PTPRQQ9UMZ3 2332 aa4.11□□□□□ -1.75
SPG11-211ENST00000558561 PKD1L2Q7Z442 2459 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms