RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 GMCL1P1Q8NEA9 526 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 OR2T12Q8NG77 320 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 OR52N5Q8NH56 324 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 FBXO30Q8TB52 745 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF473Q8WTR7 871 aaKnown RBP2.88□□□□□ -1.95
TRAV28-201ENST00000557548 PHLDA1Q8WV24 401 aaPredicted RBP2.88□□□□□ -1.95
TRAV28-201ENST00000557548 SELENOMQ8WWX9 145 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 HSD17B8Q92506 261 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 SMG7Q92540 1137 aaKnown RBP2.88□□□□□ -1.95
TRAV28-201ENST00000557548 RPL36ALQ969Q0 106 aaKnown RBP2.88□□□□□ -1.95
TRAV28-201ENST00000557548 RAB7BQ96AH8 199 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 DTNBP1Q96EV8 351 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 C17orf77Q96MU5 243 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 TAAR6Q96RI8 345 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 SPAG8Q99932 426 aaPredicted RBP2.88□□□□□ -1.95
TRAV28-201ENST00000557548 NACAP1Q9BZK3 213 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 TRIM6Q9C030 488 aaPredicted RBP2.88□□□□□ -1.95
TRAV28-201ENST00000557548 EGLN1Q9GZT9 426 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 LAT2Q9GZY6 243 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 IL25Q9H293 177 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 DPEP3Q9H4B8 488 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 ZDHHC6Q9H6R6 413 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 RAVER2Q9HCJ3 691 aaKnown RBP2.88□□□□□ -1.95
TRAV28-201ENST00000557548 CHST11Q9NPF2 352 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 SDR39U1Q9NRG7 319 aaPredicted RBP2.88□□□□□ -1.95
TRAV28-201ENST00000557548 ELOVL5Q9NYP7 299 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 TMOD2Q9NZR1 351 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 COPS7AQ9UBW8 275 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 TNNQ9UQP3 1299 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 NCKAP1Q9Y2A7 1128 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 RIPK3Q9Y572 518 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 ATAD2BQ9ULI0 1458 aa2.88□□□□□ -1.95
TRAV28-201ENST00000557548 CKAP5Q14008 2032 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 LOC101059948A0A1B0GTJ6 334 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 A0A1W2PPI3 338 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 ASPDHA6ND91 283 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 M0R296 226 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 PES1O00541 588 aaKnown RBP2.87□□□□□ -1.95
TRAV28-201ENST00000557548 FPGTO14772 594 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 PPEF2O14830 753 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SYNGR3O43761 229 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 XPNPEP2O43895 674 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CTSVO60911 334 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 GRAP2O75791 330 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 OR6A2O95222 327 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 TOMM40O96008 361 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 RAF1P04049 648 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CETPP11597 493 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CD59P13987 128 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 LHCGRP22888 699 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 GJB2P29033 226 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 ADSSP30520 456 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CETN2P41208 172 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 KCNJ4P48050 445 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 TRPC1P48995 793 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 HNMTP50135 292 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 MTTPP55157 894 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CLDN17P56750 224 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 KCNK10P57789 538 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 KRTAP10-11P60412 298 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 TUBA1BP68363 451 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 IRX4P78413 519 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 LGALS3BPQ08380 585 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SNTA1Q13424 505 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 RAPSNQ13702 412 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 GIT2Q14161 759 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 KIR2DS3Q14952 304 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 OPCMLQ14982 345 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SF3B4Q15427 424 aaKnown RBP eCLIP2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CARTPTQ16568 116 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 KRTAP15-1Q3LI76 137 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF260Q3ZCT1 412 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 GPR33Q49SQ1 333 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 HSP90AB3PQ58FF7 597 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 XKR3Q5GH77 459 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 HERC4Q5GLZ8 1057 aaPredicted RBP2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SIRPB2Q5JXA9 342 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SLC35D3Q5M8T2 416 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 RIPPLY2Q5TAB7 128 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF425Q6IV72 752 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 UGT3A1Q6NUS8 523 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CD164L2Q6UWJ8 174 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 RGS9BPQ6ZS82 235 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 TMEM26Q6ZUK4 368 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SLC16A9Q7RTY1 509 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 PRUNE1Q86TP1 453 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 PLD3Q8IV08 490 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CCDC60Q8IWA6 550 aaPredicted RBP2.87□□□□□ -1.95
TRAV28-201ENST00000557548 PRSS35Q8N3Z0 413 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 MAPKAPK5-AS1Q8N8E1 139 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 BANPQ8N9N5 519 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 OR4C15Q8NGM1 316 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SPATA18Q8TC71 538 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 UBTD2Q8WUN7 234 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF606Q8WXB4 792 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SEPT8Q92599 483 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 ARHGAP45Q92619 1136 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 NSL1Q96IY1 281 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 ADGRG7Q96K78 797 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms