RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 HERC3Q15034 1050 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 PCBP2Q15366 365 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC00239-201ENST00000556973 ERCC6LQ2NKX8 1250 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 VWA2Q5GFL6 755 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 PAGE2BQ5JRK9 111 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 EMBQ6PCB8 327 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 TDRPQ86YL5 185 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 AFAP1L2Q8N4X5 818 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 AMER3Q8N944 861 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 TMEM102Q8N9M5 508 aaPredicted RBP10.14□□□□□ -0.79
LINC00239-201ENST00000556973 OR9A4Q8NGU2 314 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 CREB3L4Q8TEY5 395 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 FER1L6-AS2Q96M78 137 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 SPSB2Q99619 263 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 MRPL57Q9BQC6 102 aaKnown RBP10.14□□□□□ -0.79
LINC00239-201ENST00000556973 PARD6BQ9BYG5 372 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 SLC6A16Q9GZN6 736 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 ING2Q9H160 280 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 MRPL46Q9H2W6 279 aaKnown RBP10.14□□□□□ -0.79
LINC00239-201ENST00000556973 RHBGQ9H310 441 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 ACSS2Q9NR19 701 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 SEMA3GQ9NS98 782 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 C14orf105Q9NVL8 296 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 CPSF2Q9P2I0 782 aaKnown RBP10.14□□□□□ -0.79
LINC00239-201ENST00000556973 TRPC4Q9UBN4 977 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 CTSFQ9UBX1 484 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 TBK1Q9UHD2 729 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 ZNF490Q9ULM2 529 aaPredicted RBP10.14□□□□□ -0.79
LINC00239-201ENST00000556973 MRPS2Q9Y399 296 aaKnown RBP10.14□□□□□ -0.79
LINC00239-201ENST00000556973 ASB1Q9Y576 335 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 ANGPTL3Q9Y5C1 460 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 NBEAQ8NFP9 2946 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 NUP210LQ5VU65 1888 aa10.14□□□□□ -0.79
LINC00239-201ENST00000556973 SCN3AQ9NY46 2000 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 MKRN2OSH3BPM6 223 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 STX16-NPEPL1H3BU86 382 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 E2F3O00716 465 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 STX16O14662 325 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 PRAMEF4O60810 478 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 SMIM24O75264 130 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 GSTA1P08263 222 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 SMIM10L1P0DMW3 83 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 ALOX12P18054 663 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 IL1RNP18510 177 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 IL10P22301 178 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 PIK3CGP48736 1102 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 STXBP1P61764 594 aaKnown RBP10.13□□□□□ -0.79
LINC00239-201ENST00000556973 KLC1Q07866 573 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 HYAL2Q12891 473 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 KCNAB2Q13303 367 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 GTF2H2Q13888 395 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 SLBPQ14493 270 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC00239-201ENST00000556973 PRAMEF9Q5VWM5 478 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 LIPJQ5W064 366 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 GTF2H2CQ6P1K8 395 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 SHISA6Q6ZSJ9 500 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 ABHD13Q7L211 337 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 LAPTM4BQ86VI4 370 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 TMEM151AQ8N4L1 468 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 TEX9Q8N6V9 391 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 OR51Q1Q8NH59 317 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 UTP15Q8TED0 518 aaKnown RBP10.13□□□□□ -0.79
LINC00239-201ENST00000556973 AENQ8WTP8 325 aaKnown RBP10.13□□□□□ -0.79
LINC00239-201ENST00000556973 MZB1Q8WU39 189 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 CAVIN3Q969G5 261 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 UBE2E3Q969T4 207 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 SMIM10Q96HG1 83 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 VPS50Q96JG6 964 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 CRB3Q9BUF7 120 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 SOX17Q9H6I2 414 aaPredicted RBP10.13□□□□□ -0.79
LINC00239-201ENST00000556973 CLK4Q9HAZ1 481 aaKnown RBP10.13□□□□□ -0.79
LINC00239-201ENST00000556973 XPR1Q9UBH6 696 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC00239-201ENST00000556973 NAALAD2Q9Y3Q0 740 aa10.13□□□□□ -0.79
LINC00239-201ENST00000556973 V9GYY5 206 aaPredicted RBP10.13□□□□□ -0.79
LINC00239-201ENST00000556973 A0A1W2PPM1 405 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 LRIT2A6NDA9 550 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 ARGFXA6NJG6 315 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 GOLGA8RI6L899 631 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 SGK494L7N484 410 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 AGPSO00116 658 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 PCDH17O14917 1159 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 UGDHO60701 494 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 GALR3O60755 368 aaPredicted RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 CDH16O75309 829 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 CLEC3AO75596 197 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 KLHL18O94889 574 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 SIX3O95343 332 aaPredicted RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 BMP10O95393 424 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 HEXBP07686 556 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 NUDT17P0C025 328 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 ZNF888P0CJ79 500 aaPredicted RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 PYGBP11216 843 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 KRT15P19012 456 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 CD22P20273 847 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 DEKP35659 375 aaKnown RBP10.12□□□□□ -0.79
LINC00239-201ENST00000556973 HNF4AP41235 474 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 SLCO1A2P46721 670 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 CCL11P51671 97 aa10.12□□□□□ -0.79
LINC00239-201ENST00000556973 EMP2P54851 167 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 204.9 ms