RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ZNF559Q9BR84 538 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 TMUB1Q9BVT8 246 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 KIFC1Q9BW19 673 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 KCNJ16Q9NPI9 418 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 LZTFL1Q9NQ48 299 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 KLHL42Q9P2K6 505 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 VPS9D1Q9Y2B5 631 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 SLC22A7Q9Y694 548 aa11.16□□□□□ -0.62
ACTN1-221ENST00000556571 PRRC2AP48634 2157 aaKnown RBP11.16□□□□□ -0.62
ACTN1-221ENST00000556571 A0A1B0GTH9 108 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 USP27XA6NNY8 438 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 GOLGA8KD6RF30 607 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 GOLGA8TH3BQL2 631 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 GFYI3L273 518 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 TFECO14948 347 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-221ENST00000556571 RDH16O75452 317 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 TPOP07202 933 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 OGNP20774 298 aaKnown RBP11.15□□□□□ -0.62
ACTN1-221ENST00000556571 TPP2P29144 1249 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-221ENST00000556571 TRHRP34981 398 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-221ENST00000556571 SKIV2L2P42285 1042 aaKnown RBP11.15□□□□□ -0.62
ACTN1-221ENST00000556571 HLCSP50747 726 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 CLCN7P51798 805 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 MLF1P58340 268 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 CES4AQ5XG92 561 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 ASPGQ86U10 573 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 CD163Q86VB7 1156 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 TMEM200AQ86VY9 491 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 PDSS2Q86YH6 399 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 DMRTC2Q8IXT2 367 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-221ENST00000556571 MARVELD2Q8N4S9 558 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 SLC13A3Q8WWT9 602 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 RND1Q92730 232 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 TSLPQ969D9 159 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 MFSD3Q96ES6 412 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 PEX11GQ96HA9 241 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 HES6Q96HZ4 224 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 PCBD2Q9H0N5 130 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 NPDC1Q9NQX5 325 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-221ENST00000556571 LANCL2Q9NS86 450 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 KCNN3Q9UGI6 736 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 KLF13Q9Y2Y9 288 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-221ENST00000556571 NAALAD2Q9Y3Q0 740 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 CAPN6Q9Y6Q1 641 aa11.15□□□□□ -0.62
ACTN1-221ENST00000556571 NKX2-6A6NCS4 301 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 KLRC4-KLRK1H3BQV0 150 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 PRMT3O60678 531 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 CDC123O75794 336 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 TOXO94900 526 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 HOXD4P09016 255 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 MPC1LP0DKB6 136 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 ENO3P13929 434 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 HOXB4P17483 251 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 MSX1P28360 303 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 IMPA1P29218 277 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 DNAJA1P31689 397 aaKnown RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 RPL22P35268 128 aaKnown RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 MEOX1P50221 254 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 MEF2AQ02078 507 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 TFF3Q07654 80 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 HERC3Q15034 1050 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 RPS6KA1Q15418 735 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 SEL1L2Q5TEA6 688 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 CES3Q6UWW8 571 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 C4orf22Q6V702 233 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 SLC26A11Q86WA9 606 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 ZNF227Q86WZ6 799 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 SULF2Q8IWU5 870 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 KIF2BQ8N4N8 673 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 PRELID2Q8N945 189 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 KCT2Q8NC54 265 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 ZCCHC10Q8TBK6 192 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 C1orf54Q8WWF1 131 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 TBC1D20Q96BZ9 403 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 RBCK1Q9BYM8 510 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 UCK2Q9BZX2 261 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 TP63Q9H3D4 680 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 CCDC177Q9NQR7 707 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-221ENST00000556571 SOX13Q9UN79 622 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 RNF6Q9Y252 685 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 HRH3Q9Y5N1 445 aa11.14□□□□□ -0.63
ACTN1-221ENST00000556571 FAM90A27PA6NNH2 459 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 FCHO1O14526 889 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 PEX1O43933 1283 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 HS6ST1O60243 411 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 FHP07954 510 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 SLC35G6P0C7Q6 338 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 ZSCAN5DPP0CG00 497 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 TFEBP19484 476 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 JAK1P23458 1154 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 MGAT1P26572 445 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 GRK3P35626 688 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 ITGA8P53708 1063 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 IST1P53990 364 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 SKP1P63208 163 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 BASP1P80723 227 aaKnown RBP11.13□□□□□ -0.63
ACTN1-221ENST00000556571 SNX1Q13596 522 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 CMPK2Q5EBM0 449 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 KIAA0930Q6ICG6 404 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms