RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 PDHXO00330 501 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 TSPAN1O60635 241 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 UBTFL1P0CB47 393 aaPredicted RBP4.2□□□□□ -1.74
PRPF39-209ENST00000556353 PSMB10P40306 273 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 BTDP43251 543 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 LEPRP48357 1165 aaKnown RBP4.2□□□□□ -1.74
PRPF39-209ENST00000556353 CD151P48509 253 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 TDO2P48775 406 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 MRPL12P52815 198 aaKnown RBP4.2□□□□□ -1.74
PRPF39-209ENST00000556353 PNLIPRP2P54317 469 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 MAZP56270 477 aaKnown RBP4.2□□□□□ -1.74
PRPF39-209ENST00000556353 TIMM10P62072 90 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 MECOMQ03112 1051 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 PHLDA2Q53GA4 152 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 CCDC92Q53HC0 331 aaPredicted RBP4.2□□□□□ -1.74
PRPF39-209ENST00000556353 CAVIN4Q5BKX8 364 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 DHRS7BQ6IAN0 325 aaPredicted RBP4.2□□□□□ -1.74
PRPF39-209ENST00000556353 EID3Q8N140 333 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 FBXO39Q8N4B4 442 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 ZNF519Q8TB69 540 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 RSPH1Q8WYR4 309 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 ITFG2Q969R8 447 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 IDI2Q9BXS1 227 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 PRO3102Q9H379 93 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 ZHX3Q9H4I2 956 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 PPANQ9NQ55 473 aaKnown RBP4.2□□□□□ -1.74
PRPF39-209ENST00000556353 PANK4Q9NVE7 773 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 OR6C2Q9NZP2 312 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 HMG20BQ9P0W2 317 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 THEGQ9P2T0 379 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 B3GAT1Q9P2W7 334 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 DAPK2Q9UIK4 370 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 SMC3Q9UQE7 1217 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 NME7Q9Y5B8 376 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 ZNF318Q5VUA4 2279 aa4.2□□□□□ -1.74
PRPF39-209ENST00000556353 MYH6P13533 1939 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 VPS13AQ96RL7 3174 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 MYO15AQ9UKN7 3530 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 GPR75-ASB3A0A0A6YYF3 556 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 SOCS3O14543 225 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 AP3D1O14617 1153 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 PAPSS1O43252 624 aaPredicted RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 PTP4A3O75365 173 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 FRAT2O75474 233 aaPredicted RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 LDHCP07864 332 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 GJA1P17302 382 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 RPL21P46778 160 aaKnown RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 SQLEQ14534 574 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 FASTKD3Q14CZ7 662 aaKnown RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 PDLIM3Q53GG5 364 aaPredicted RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 ELFN2Q5R3F8 820 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 ZNF343Q6P1L6 599 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 GPRIN3Q6ZVF9 776 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 RTN4RL2Q86UN3 420 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 TTC30BQ8N4P2 665 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 NPEPL1Q8NDH3 523 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 PRSS33Q8NF86 280 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 GPRC5AQ8NFJ5 357 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 OR2L2Q8NH16 312 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 OR52N5Q8NH56 324 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 NSUN4Q96CB9 384 aaKnown RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 MAK16Q9BXY0 300 aaKnown RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 MIS12Q9H081 205 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 ZCCHC17Q9NP64 241 aaKnown RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 FAM120CQ9NX05 1096 aaKnown RBP4.19□□□□□ -1.74
PRPF39-209ENST00000556353 ZNF69Q9UC07 566 aa4.19□□□□□ -1.74
PRPF39-209ENST00000556353 ANKUB1A6NFN9 424 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 VILLO15195 856 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 OR10H2O60403 315 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 ENTPD3O75355 529 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 AVILO75366 819 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 CYP2A7P20853 494 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 CDH3P22223 829 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 CASQ1P31415 396 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 PTGER3P43115 390 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 SLC9A3P48764 834 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 CYCSP99999 105 aaKnown RBP4.18□□□□□ -1.74
PRPF39-209ENST00000556353 NFATC2Q13469 925 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 SLC25A53Q5H9E4 307 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 RAB41Q5JT25 222 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 CCDC73Q6ZRK6 1079 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 BTN2A1Q7KYR7 527 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 Q8N377 158 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 OR13C3Q8NGS6 347 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 CENPTQ96BT3 561 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 ARSGQ96EG1 525 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 MPP4Q96JB8 637 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 PARK7Q99497 189 aaKnown RBP4.18□□□□□ -1.74
PRPF39-209ENST00000556353 API5Q9BZZ5 524 aaKnown RBP4.18□□□□□ -1.74
PRPF39-209ENST00000556353 OR2B2Q9GZK3 357 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 SERINC1Q9NRX5 453 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 PSD3Q9NYI0 1048 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 TMOD2Q9NZR1 351 aa4.18□□□□□ -1.74
PRPF39-209ENST00000556353 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.18□□□□□ -1.74
PRPF39-209ENST00000556353 PTPRSQ13332 1948 aa4.17□□□□□ -1.74
PRPF39-209ENST00000556353 LAMA4Q16363 1823 aa4.17□□□□□ -1.74
PRPF39-209ENST00000556353 USP34Q70CQ2 3546 aa4.17□□□□□ -1.74
PRPF39-209ENST00000556353 CXCL11O14625 94 aa4.17□□□□□ -1.74
PRPF39-209ENST00000556353 IDH3BO43837 385 aa4.17□□□□□ -1.74
PRPF39-209ENST00000556353 OR2T7P0C7T2 308 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms