RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 BGNP21810 368 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ALAS2P22557 587 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 PTX3P26022 381 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 HSD3B2P26439 372 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 SLC5A2P31639 672 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 AVPR1BP47901 424 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 SLC1A6P48664 564 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ATP1A2P50993 1020 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ABCE1P61221 599 aaKnown RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 CYP4F2P78329 520 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 FOXK2Q01167 660 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 DDX39BQ13838 428 aaKnown RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 FAM53BQ14153 422 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 MAP7Q14244 749 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 HERC3Q15034 1050 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 PRTGQ2VWP7 1150 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 SGO1Q5FBB7 561 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ARL13AQ5H913 290 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 PRAMEF9Q5VWM5 478 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 RHBDD2Q6NTF9 364 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 PWWP2BQ6NUJ5 590 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 LETMD1Q6P1Q0 360 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 PRMT9Q6P2P2 845 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 TRIM40Q6P9F5 258 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ZCCHC23Q6ZST2 131 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 RPS27LQ71UM5 84 aaKnown RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 VN1R4Q7Z5H5 301 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 SYVN1Q86TM6 617 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CUZD1Q86UP6 607 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.28□□□□□ -1.24
TDP1-214ENST00000556063 CLYBLQ8N0X4 340 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ESX1Q8N693 406 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CDYL2Q8N8U2 506 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 GBP7Q8N8V2 638 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 HUS1BQ8NHY5 278 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 FAM76AQ8TAV0 307 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 MDM1Q8TC05 714 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 NT5CQ8TCD5 201 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 LRRC8CQ8TDW0 803 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 AGAP11Q8TF27 550 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ZNF473Q8WTR7 871 aaKnown RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 SELENOMQ8WWX9 145 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 TM4SF19Q96DZ7 209 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 PRR11Q96HE9 360 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 FAR2Q96K12 515 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 LRFN5Q96NI6 719 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CDK15Q96Q40 435 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 SERPINI1Q99574 410 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 DPH2Q9BQC3 489 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 ROGDIQ9GZN7 287 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ILKAPQ9H0C8 392 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 SPNS1Q9H2V7 528 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 MANSC1Q9H8J5 431 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 CLK4Q9HAZ1 481 aaKnown RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 ANKHQ9HCJ1 492 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ACSS2Q9NR19 701 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 THAP1Q9NVV9 213 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 PSD3Q9NYI0 1048 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 AHSPQ9NZD4 102 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 NDOR1Q9UHB4 597 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ACSL6Q9UKU0 697 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 PADI1Q9ULC6 663 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 ZNF490Q9ULM2 529 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 PPT2Q9UMR5 302 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 WASF3Q9UPY6 502 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 RUVBL1Q9Y265 456 aaKnown RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 TMEM184BQ9Y519 407 aaPredicted RBP7.28□□□□□ -1.24
TDP1-214ENST00000556063 SLC22A7Q9Y694 548 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 SCN3AQ9NY46 2000 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 MYO15AQ9UKN7 3530 aa7.28□□□□□ -1.24
TDP1-214ENST00000556063 USP34Q70CQ2 3546 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 ADAMTS20P59510 1910 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 A0A1W2PNU3 283 aaPredicted RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 LRIT2A6NDA9 550 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 C9orf172C9J069 976 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 C9J4A7 227 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 MEN1O00255 615 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 MANBAO00462 879 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 PPP6CO00743 305 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 KLF11O14901 512 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 AZIN1O14977 448 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 HCRTR1O43613 425 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 BRINP1O60477 761 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 SEMA3DO95025 777 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 NTRK1P04629 796 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 FGF4P08620 206 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 ALOX12P18054 663 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 RAP1GDS1P52306 607 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 ARFIP1P53367 373 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 DCDP81605 110 aaKnown RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 ABHD18Q0P651 414 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 BST1Q10588 318 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 CSTF3Q12996 717 aaKnown RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 CUL3Q13618 768 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 IMPG1Q17R60 797 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 HKDC1Q2TB90 917 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 AP5B1Q2VPB7 878 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 TBC1D25Q3MII6 688 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms