RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SERPING1P05155 500 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 SUPT20HL2P0C7V6 817 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 UMPSP11172 480 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 ASCL1P50553 236 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 NTRK2Q16620 822 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 KNOP1Q1ED39 458 aaKnown RBP1.97□□□□□ -2.09
SRP54-207ENST00000555535 VWC2Q2TAL6 325 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 MARC1Q5VT66 337 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 IGFL2Q6UWQ7 119 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 C5orf24Q7Z6I8 188 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 APPL2Q8NEU8 664 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 OR4C15Q8NGM1 316 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 OR6T1Q8NGN1 323 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 OR5M9Q8NGP3 310 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 PRPF31Q8WWY3 499 aaKnown RBP1.97□□□□□ -2.09
SRP54-207ENST00000555535 TEX12Q9BXU0 123 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 GPR88Q9GZN0 384 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 SDCBP2Q9H190 292 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 GHITMQ9H3K2 345 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 ACTL8Q9H568 366 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 NOL11Q9H8H0 719 aaKnown RBP1.97□□□□□ -2.09
SRP54-207ENST00000555535 ANKZF1Q9H8Y5 726 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 GIMAP4Q9NUV9 329 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 IL36AQ9UHA7 158 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 SLC24A2Q9UI40 661 aa1.97□□□□□ -2.09
SRP54-207ENST00000555535 RSPH10B2B2RC85 870 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 E7ENQ6 273 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 RPS6KA5O75582 802 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 OR6B1O95007 311 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 HCKP08631 526 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 RSPH10BP0C881 870 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 CSH1P0DML2 217 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 CSH2P0DML3 217 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 SAT1P21673 171 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 AZGP1P25311 298 aaKnown RBP1.96□□□□□ -2.1
SRP54-207ENST00000555535 FASP25445 335 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 SLC1A4P43007 532 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 TTC31Q49AM3 519 aaPredicted RBP1.96□□□□□ -2.1
SRP54-207ENST00000555535 FGD3Q5JSP0 725 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 SPANXN4Q5MJ08 99 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 WSCD1Q658N2 575 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 ZNF530Q6P9A1 599 aaPredicted RBP1.96□□□□□ -2.1
SRP54-207ENST00000555535 MCM10Q7L590 875 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 ANKRD13CQ8N6S4 541 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 MUS81Q96NY9 551 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 RTBDNQ9BSG5 229 aaPredicted RBP1.96□□□□□ -2.1
SRP54-207ENST00000555535 PAPOLGQ9BWT3 736 aaKnown RBP1.96□□□□□ -2.1
SRP54-207ENST00000555535 STRADBQ9C0K7 418 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 CNOT10Q9H9A5 744 aaKnown RBP1.96□□□□□ -2.1
SRP54-207ENST00000555535 WDR41Q9HAD4 459 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 CUTCQ9NTM9 273 aa1.96□□□□□ -2.1
SRP54-207ENST00000555535 DDX25Q9UHL0 483 aaKnown RBP1.96□□□□□ -2.1
SRP54-207ENST00000555535 RSF1Q96T23 1441 aaPredicted RBP1.96□□□□□ -2.1
SRP54-207ENST00000555535 IL16Q14005 1332 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 KLF18A0A0U1RQI7 1052 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 WI2-2373I1.2A0A1W2PRP0 233 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 CCDC189A1A4V9 331 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 A8MV72 311 aaPredicted RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 SRPX2O60687 465 aaPredicted RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 ZBED4O75132 1171 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 FOXH1O75593 365 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 BAIAP3O94812 1187 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 ATP5BP06576 529 aaKnown RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 CD1DP15813 335 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 CAPN3P20807 821 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 UCNP55089 124 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 POM121L1PQ3SYA9 428 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 SLC22A6Q4U2R8 563 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 SUSD4Q5VX71 490 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 CCDC70Q6NSX1 233 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 PRSS55Q6UWB4 352 aaPredicted RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 C1orf122Q6ZSJ8 110 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 IQCHQ86VS3 1027 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 LRRC49Q8IUZ0 686 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 NAXDQ8IW45 347 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 CCDC60Q8IWA6 550 aaPredicted RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 RPAP2Q8IXW5 612 aaPredicted RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 DND1Q8IYX4 353 aaKnown RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 TSPAN14Q8NG11 270 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 GTSF1Q8WW33 167 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 OTUB1Q96FW1 271 aaPredicted RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 MPP4Q96JB8 637 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 RIMS4Q9H426 269 aaPredicted RBP1.95□□□□□ -2.1
SRP54-207ENST00000555535 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.95□□□□□ -2.1
SRP54-207ENST00000555535 TXNDC16Q9P2K2 825 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 SPATA2Q9UM82 520 aa1.95□□□□□ -2.1
SRP54-207ENST00000555535 TRBV5-4A0A0C4DH59 114 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 FSD2A1L4K1 749 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 NKX6-3A6NJ46 265 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 A8MU76 341 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 A8MVM7 634 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 C17orf105B2RV13 164 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 SIGLEC5O15389 551 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 AP5Z1O43299 807 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 SPRY1O43609 319 aaPredicted RBP1.94□□□□□ -2.1
SRP54-207ENST00000555535 KBTBD11O94819 623 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 IGHG1P01857 330 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 ELK1P19419 428 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 GIFP27352 417 aa1.94□□□□□ -2.1
SRP54-207ENST00000555535 SFTPDP35247 375 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms