RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 VPS39Q96JC1 886 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 CNDP1Q96KN2 507 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 ZFYVE21Q9BQ24 234 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 SLX1AQ9BQ83 275 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 PLCD4Q9BRC7 762 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 ZNF160Q9HCG1 818 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 INTS10Q9NVR2 710 aaKnown RBP10.05□□□□□ -0.8
SHMT2-215ENST00000554656 IL1RAPL1Q9NZN1 696 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 C3orf18Q9UK00 162 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 SCN3AQ9NY46 2000 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 APCP25054 2843 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 FBN2P35556 2912 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 A0A1W2PQ72 361 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 MYO1CO00159 1063 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 KPNA5O15131 536 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 P2RX6O15547 441 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 GLRA3O75311 464 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 PSIP1O75475 530 aaKnown RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 AHSGP02765 367 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 ALDOAP04075 364 aaKnown RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 PRR35P0CG20 571 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 COL6A2P12110 1019 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 FBLP22087 321 aaKnown RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 TYK2P29597 1187 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 SLC1A2P43004 574 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 TDGF1P3P51864 188 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 POU4F1Q01851 419 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 GUCY1A3Q02108 690 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 CDC16Q13042 620 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 BMPR2Q13873 1038 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 MPP2Q14168 576 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 ELOAQ14241 798 aaKnown RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 MUM1Q2TAK8 710 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 HKDC1Q2TB90 917 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 RNF187Q5TA31 235 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 B3GNTL1Q67FW5 361 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 ZNF324BQ6AW86 544 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 ZNF470Q6ECI4 717 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 PRMT9Q6P2P2 845 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 TTC23LQ6PF05 361 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 RGS9BPQ6ZS82 235 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 SDCCAG8Q86SQ7 713 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 CILP2Q8IUL8 1156 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 OTUD6BQ8N6M0 293 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 PPFIBP2Q8ND30 876 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 OR9A1PQ8NGU1 263 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 FAR1Q8WVX9 515 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 CKAP2Q8WWK9 683 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 MIEF2Q96C03 454 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 TSPAN17Q96FV3 270 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 IQCGQ9H095 443 aaKnown RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 VPS11Q9H270 941 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 EPS8L2Q9H6S3 715 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 AGPAT4Q9NRZ5 378 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 ZNF282Q9UDV7 671 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 DCDC2Q9UHG0 476 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 GRID1Q9ULK0 1009 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 OSGIN2Q9Y236 505 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 RUVBL1Q9Y265 456 aaKnown RBP10.04□□□□□ -0.8
SHMT2-215ENST00000554656 CRYL1Q9Y2S2 319 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 MED16Q9Y2X0 877 aa10.04□□□□□ -0.8
SHMT2-215ENST00000554656 IDSB3KWA1 339 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 LRRTM2O43300 516 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 FOXS1O43638 330 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 SPAG7O75391 227 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 SLC16A8O95907 504 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 ESR1P03372 595 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 DHRS4L1P0CG22 281 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 EDN3P14138 238 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 CRABP2P29373 138 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 CMPK1P30085 196 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 ETV4P43268 484 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 CLCN7P51798 805 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 EMP3P54852 163 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 ADARP55265 1226 aaKnown RBP10.03□□□□□ -0.8
SHMT2-215ENST00000554656 OCA2Q04671 838 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 EEF1A2Q05639 463 aaKnown RBP10.03□□□□□ -0.8
SHMT2-215ENST00000554656 DSG2Q14126 1118 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 TLR1Q15399 786 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 ZKSCAN8Q15776 578 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-215ENST00000554656 SYT16Q17RD7 645 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 HHATQ5VTY9 493 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 IRAK1BP1Q5VVH5 260 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 C1QL3Q5VWW1 255 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 FAAH2Q6GMR7 532 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 ZNF549Q6P9A3 640 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 DENND6AQ8IWF6 608 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 SIRT6Q8N6T7 355 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 CSNK1A1LQ8N752 337 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 ANKRD42Q8N9B4 389 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 BRIX1Q8TDN6 353 aaKnown RBP10.03□□□□□ -0.8
SHMT2-215ENST00000554656 TCP10LQ8TDR4 215 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 DYDC1Q8WWB3 177 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 SMPDL3AQ92484 453 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 MAGEB18Q96M61 343 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 FOPNLQ96NB1 174 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 OR2A5Q96R48 311 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 TAAR6Q96RI8 345 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 LMF1Q96S06 567 aa10.03□□□□□ -0.8
SHMT2-215ENST00000554656 PKP4Q99569 1192 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms