RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CLCNKAP51800 687 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 MAGOHP61326 146 aaKnown RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 DMPKQ09013 629 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 HSPA14Q0VDF9 509 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 GRIK2Q13002 908 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 BOP1Q14137 746 aaKnown RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 CSHL1Q14406 222 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 SHBQ15464 509 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 CCDC6Q16204 474 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 INSCQ1MX18 579 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 MINDY4Q4G0A6 757 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 PLEKHS1Q5SXH7 462 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 METRNLQ641Q3 311 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 RAPH1Q70E73 1250 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 DOK3Q7L591 496 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 OTOAQ7RTW8 1153 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 PIWIL4Q7Z3Z4 852 aaKnown RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 RASGRP3Q8IV61 690 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 SRRM1Q8IYB3 904 aaKnown RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 CFAP206Q8IYR0 622 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 CNPY4Q8N129 248 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 C4orf33Q8N1A6 199 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 SPATA6LQ8N4H0 392 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 ZNF808Q8N4W9 903 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 BANPQ8N9N5 519 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 SUMF1Q8NBK3 374 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 ZBTB34Q8NCN2 500 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 CEP76Q8TAP6 659 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 EEF1AKMT1Q8WVE0 214 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 KCTD4Q8WVF5 259 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 SKA1Q96BD8 255 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 NXNL1Q96CM4 212 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 LINGO1Q96FE5 620 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 PDLIM5Q96HC4 596 aaKnown RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 CABS1Q96KC9 395 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 ATP6V1G3Q96LB4 118 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 GPR78Q96P69 363 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 PRRX2Q99811 253 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 VRK1Q99986 396 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 LRRC61Q9BV99 259 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 TSSK1BQ9BXA7 367 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 VPS11Q9H270 941 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 OR52A5Q9H2C5 316 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 ERVMER34-1Q9H9K5 563 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 KLC4Q9NSK0 619 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 APOBEC3BQ9UH17 382 aaKnown RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 TLK1Q9UKI8 766 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 IKZF3Q9UKT9 509 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 DNAJC16Q9Y2G8 782 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 ACOT9Q9Y305 439 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 TESMINQ9Y4I5 508 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 PCDHGA5Q9Y5G8 931 aa6.11□□□□□ -1.43
SCFD1-212ENST00000554486 ASCC3Q8N3C0 2202 aaKnown RBP6.11□□□□□ -1.43
SCFD1-212ENST00000554486 RIF1Q5UIP0 2472 aaKnown RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ASXL3Q9C0F0 2248 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 PCM1Q15154 2024 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 A6NCN8 305 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 VSTM5A8MXK1 200 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 EIF3FO00303 357 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ZBTB14O43829 449 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 TYROBPO43914 113 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 SPAG7O75391 227 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 PIAS2O75928 621 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 KLHL2O95198 593 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 MATN4O95460 622 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 EML2O95834 649 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 CFIP05156 583 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 SBK3P0C264 359 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 MPC1LP0DKB6 136 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 CBSLP0DN79 551 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ENO3P13929 434 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 BRAFP15056 766 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 CD1DP15813 335 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 DGKAP23743 735 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ACADLP28330 430 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 CBSP35520 551 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 MPLP40238 635 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 SLC26A3P40879 764 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 RGS4P49798 205 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 BLKP51451 505 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 CTXN1P60606 82 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 HNRNPKP61978 463 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 IRX4P78413 519 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ABRQ12979 859 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 RPA4Q13156 261 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 C1orf61Q13536 156 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ELAVL1Q15717 326 aaKnown RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 TTLL9Q3SXZ7 439 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 SYTL3Q4VX76 610 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 TAF1BQ53T94 588 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 TECRLQ5HYJ1 363 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 LAIR1Q6GTX8 287 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 CAPRIN2Q6IMN6 1127 aaKnown RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 SLC30A9Q6PML9 568 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 CDHR3Q6ZTQ4 885 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 NEK10Q6ZWH5 1172 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 OVCH2Q7RTZ1 564 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 CCDC91Q7Z6B0 441 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 RABEPKQ7Z6M1 372 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms