RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ATP1B2P14415 290 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-209ENST00000553659 FOLR1P15328 257 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 PPP1CAP62136 330 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 CDKL1Q00532 357 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 STX5Q13190 355 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 PWWP2BQ6NUJ5 590 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 KLHL35Q6PF15 583 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 LURAP1LQ8IV03 231 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 DDHD1Q8NEL9 900 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 TRPC4APQ8TEL6 797 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 THAP4Q8WY91 577 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 SERPINI1Q99574 410 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 TRIM54Q9BYV2 358 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 ACTL8Q9H568 366 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 TMEM45AQ9NWC5 275 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 GALPQ9UBC7 116 aa15.37■□□□□ 0.05
ACTN1-209ENST00000553659 TMEM233B4DJY2 109 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 UBFD1O14562 309 aaKnown RBP15.36■□□□□ 0.05
ACTN1-209ENST00000553659 SIX3O95343 332 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-209ENST00000553659 PDGFAP04085 211 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 MSH3P20585 1137 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 CPOXP36551 454 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 MRPL19P49406 292 aaKnown RBP15.36■□□□□ 0.05
ACTN1-209ENST00000553659 ACY1Q03154 408 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 DMPKQ09013 629 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 CUL3Q13618 768 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 KCNAB1Q14722 419 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 RPE65Q16518 533 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 GSTA3Q16772 222 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 UGT3A2Q3SY77 523 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 SBSNQ6UWP8 590 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 GPRIN3Q6ZVF9 776 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 AMZ2Q86W34 360 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 KMT5CQ86Y97 462 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 ULK2Q8IYT8 1036 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 ENDOVQ8N8Q3 282 aaKnown RBP15.36■□□□□ 0.05
ACTN1-209ENST00000553659 TWIST2Q8WVJ9 160 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 STMN2Q93045 179 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 MOCOSQ96EN8 888 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 HGH1Q9BTY7 390 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 DCLRE1BQ9H816 532 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 AKIRIN1Q9H9L7 192 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-209ENST00000553659 EFCAB1Q9HAE3 211 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 RNPEPL1Q9HAU8 725 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 ACSS2Q9NR19 701 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 RIC8BQ9NVN3 520 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 UTP6Q9NYH9 597 aaKnown RBP15.36■□□□□ 0.05
ACTN1-209ENST00000553659 BCAP29Q9UHQ4 241 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 IKZF3Q9UKT9 509 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 COPG1Q9Y678 874 aaKnown RBP15.36■□□□□ 0.05
ACTN1-209ENST00000553659 DNMT3AQ9Y6K1 912 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-209ENST00000553659 PRSS21Q9Y6M0 314 aa15.36■□□□□ 0.05
ACTN1-209ENST00000553659 SPTBP11277 2137 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 ESPL1Q14674 2120 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 SHANK1Q9Y566 2161 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 TTLL8A6PVC2 850 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 IQCF5A8MTL0 148 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 GPR39O43194 453 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 POP7O75817 140 aaKnown RBP15.35■□□□□ 0.05
ACTN1-209ENST00000553659 DNAJB5O75953 348 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 OTCP00480 354 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 GSTM1P09488 218 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 LBPP18428 481 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 AKT1P31749 480 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 CDH13P55290 713 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 RPS15P62841 145 aaKnown RBP15.35■□□□□ 0.05
ACTN1-209ENST00000553659 GSTM4Q03013 218 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 RBBP7Q16576 425 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 PPP1R3AQ16821 1122 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 UGT8Q16880 541 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 C4orf17Q53FE4 359 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 FAM199XQ6PEV8 388 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-209ENST00000553659 RNF165Q6ZSG1 346 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 LARP4Q71RC2 724 aaKnown RBP eCLIP15.35■□□□□ 0.05
ACTN1-209ENST00000553659 SPATA19Q7Z5L4 167 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 SYVN1Q86TM6 617 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 RASGEF1AQ8N9B8 481 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 JADE3Q92613 823 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 MAGEB10Q96LZ2 347 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-209ENST00000553659 ANKRD27Q96NW4 1050 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 CD180Q99467 661 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 MAP3K3Q99759 626 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 THTPAQ9BU02 230 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 ZCCHC2Q9C0B9 1178 aaKnown RBP15.35■□□□□ 0.05
ACTN1-209ENST00000553659 DENND2DQ9H6A0 471 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-209ENST00000553659 FGF21Q9NSA1 209 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 VPS4AQ9UN37 437 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 FIS1Q9Y3D6 152 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 DNAJC15Q9Y5T4 150 aa15.35■□□□□ 0.05
ACTN1-209ENST00000553659 BBIP1A8MTZ0 92 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 E2F3O00716 465 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 CCNT2O60583 730 aaKnown RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 JUNP05412 331 aaKnown RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 ANXA5P08758 320 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 HIST1H2AGP0C0S8 130 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-209ENST00000553659 EBLN1P0CF75 366 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 PCSK2P16519 638 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 HIST1H2ADP20671 130 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 AOAHP28039 575 aa15.34■□□□□ 0.05
ACTN1-209ENST00000553659 ARL4DP49703 201 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms