RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 IRF2P14316 349 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 GM2AP17900 193 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 JAK1P23458 1154 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 PSMB4P28070 264 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 SLC6A6P31641 620 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 CASP3P42574 277 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 ARCN1P48444 511 aaKnown RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 NT5C2P49902 561 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 MFAP3P55082 362 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 GSDMDP57764 484 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 BNC1Q01954 994 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 PNRC1Q12796 327 aaPredicted RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 CTU2Q2VPK5 515 aaKnown RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 SLC39A12Q504Y0 691 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 ELFN2Q5R3F8 820 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 TXNRD3NBQ6F5E7 133 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 SNRNP48Q6IEG0 339 aaKnown RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 RAB12Q6IQ22 244 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 ASB18Q6ZVZ8 466 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 LONP2Q86WA8 852 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 AMIGO1Q86WK6 493 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 SFR1Q86XK3 245 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 KMT5CQ86Y97 462 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 L3MBTL4Q8NA19 623 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 SMRP1Q8NCR6 262 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 LPCAT1Q8NF37 534 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 FIG4Q92562 907 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 DHX58Q96C10 678 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 PDLIM5Q96HC4 596 aaKnown RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 PANK2Q9BZ23 570 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 SLC29A3Q9BZD2 475 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 MIS12Q9H081 205 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 MRPL44Q9H9J2 332 aaKnown RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 AKIRIN1Q9H9L7 192 aaPredicted RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 Q9N2K0 584 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 DNAJC4Q9NNZ3 241 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 GKN1Q9NS71 199 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 PTTG2Q9NZH5 202 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 MALT1Q9UDY8 824 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 FBXW2Q9UKT8 454 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 ATMQ13315 3056 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 ANKHD1Q8IWZ3 2542 aaKnown RBP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 FLNAP21333 2647 aaKnown RBP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 C13orf42A0A1B0GVH6 325 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 FAM90A10PA6NDY2 464 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 CAPN9O14815 690 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 PGRMC2O15173 223 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 CTDSPLO15194 276 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 SLC28A2O43868 658 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 RAD51DO75771 328 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 WISP2O76076 250 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 PMS2P2O95744 297 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 GSRP00390 522 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 C9P02748 559 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 LINC00271P0C7V0 271 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 C8orf89P0DMQ9 161 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 MNDAP41218 407 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 NPBWR1P48145 328 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 KHKP50053 298 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 PDX1P52945 283 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 KIAA1024LP59773 190 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 DMPKQ09013 629 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 ILF2Q12905 390 aaKnown RBP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 TRAF3Q13114 568 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 TWIST1Q15672 202 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 IQCCQ4KMZ1 466 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 SETMARQ53H47 684 aaPredicted RBP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 LACTB2Q53H82 288 aaPredicted RBP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 ZNF789Q5FWF6 425 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 NOTUMQ6P988 496 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 FAM171BQ6P995 826 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 CYB5D1Q6P9G0 228 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 PIGWQ7Z7B1 504 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 CCDC83Q8IWF9 413 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 DCP1BQ8IZD4 617 aaKnown RBP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 CRYBG2Q8N1P7 616 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 CLIP4Q8N3C7 705 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 CPSF7Q8N684 471 aaKnown RBP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 LINGO1Q96FE5 620 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 PGM2Q96G03 612 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 NTPCRQ9BSD7 190 aaKnown RBP4.97□□□□□ -1.61
CPSF6-206ENST00000550987 SEZ6LQ9BYH1 1024 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 SLC2A11Q9BYW1 496 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 ZNF350Q9GZX5 532 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 LMAN1LQ9HAT1 526 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 OLFML3Q9NRN5 406 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 C11orf21Q9P2W6 132 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 TBX21Q9UL17 535 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 TMED3Q9Y3Q3 217 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 NEUROG3Q9Y4Z2 214 aa4.97□□□□□ -1.61
CPSF6-206ENST00000550987 RYR3Q15413 4870 aa4.96□□□□□ -1.61
CPSF6-206ENST00000550987 CDK5RAP2Q96SN8 1893 aa4.96□□□□□ -1.61
CPSF6-206ENST00000550987 PKD1L1Q8TDX9 2849 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 A0A1W2PRB8 838 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 MAGEA13PA6NCF6 341 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 LDB3O75112 727 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 SLC22A3O75751 556 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 PLGP00747 810 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms