RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 CCDC32Q9BV29 185 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 HERC2P3Q9BVR0 1158 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 FUNDC2Q9BWH2 189 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 GATA5Q9BWX5 397 aaPredicted RBP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 CALN1Q9BXU9 219 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 MTMR12Q9C0I1 747 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 HIPK2Q9H2X6 1198 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 RETREG1Q9H6L5 497 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 RPAP3Q9H6T3 665 aaPredicted RBP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 SYNDIG1Q9H7V2 258 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 MEAF6Q9HAF1 191 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 SIAEQ9HAT2 523 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 SYTL2Q9HCH5 934 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 RBAKQ9NYW8 714 aaPredicted RBP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 USE1Q9NZ43 259 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 BFARQ9NZS9 450 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 TMEM216Q9P0N5 145 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 KCNN3Q9UGI6 736 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 WARS2Q9UGM6 360 aaKnown RBP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 VPS51Q9UID3 782 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 ZNF229Q9UJW7 825 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 STOML2Q9UJZ1 356 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 POU2F3Q9UKI9 436 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 FBXO5Q9UKT4 447 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 AGO2Q9UKV8 859 aaKnown RBP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 NUP50Q9UKX7 468 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 ERVW-1Q9UQF0 538 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 PDE10AQ9Y233 779 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 ITM2BQ9Y287 266 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 CAB39Q9Y376 341 aaPredicted RBP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 TPRKBQ9Y3C4 175 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 PEX16Q9Y5Y5 336 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 LOXHD1Q8IVV2 1947 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 RBBP6Q7Z6E9 1792 aaKnown RBP3.2□□□□□ -1.9
CCNT1-203ENST00000550457 NAV1Q8NEY1 1877 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 MYH11P35749 1972 aa3.2□□□□□ -1.9
CCNT1-203ENST00000550457 DDX60LQ5H9U9 1706 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 OR5K3A6NET4 321 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PRR23AA6NEV1 266 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 AGAP5A6NIR3 686 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PDZK1P1A8MUH7 402 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 B4DGG1 531 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 STX16-NPEPL1H3BU86 382 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 IFRD1O00458 451 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PLOD2O00469 737 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SDHDO14521 159 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 HAT1O14929 419 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 POLR1CO15160 346 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 NCAM2O15394 837 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 HOXC11O43248 304 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SPRY2O43597 315 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TSPAN1O60635 241 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TIPRLO75663 272 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PIAS1O75925 651 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 BBOX1O75936 387 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SNAPC5O75971 98 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CNTN5O94779 1100 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PIGNO95427 931 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 IL33O95760 270 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 NDUFB10O96000 172 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CHRNA1P02708 482 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 C2P06681 752 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 THP07101 528 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 YES1P07947 543 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 RBP1P09455 135 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 THRBP10828 461 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 GYS1P13807 737 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 HOXB8P17481 243 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CTRB1P17538 263 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TNFRSF1BP20333 461 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 IL32P24001 234 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ACVR2AP27037 513 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 HTR1EP28566 365 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ERP29P30040 261 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 TM4SF1P30408 202 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ARRB2P32121 409 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ALDH7A1P49419 539 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 GLUD2P49448 558 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SLC26A2P50443 739 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CSRP3P50461 194 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SLC7A2P52569 658 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 EFNA5P52803 228 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PRKAG1P54619 331 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 ARSFP54793 590 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 NAGLUP54802 743 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 CDH13P55290 713 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 SNAP25P60880 206 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 COPZ1P61923 177 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 MRPS15P82914 257 aaKnown RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 IKQ13123 557 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PEX6Q13608 980 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 PRKG1Q13976 671 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 DAG1Q14118 895 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 STARD3Q14849 445 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 POU6F1Q14863 301 aa3.19□□□□□ -1.9
CCNT1-203ENST00000550457 POLD3Q15054 466 aaPredicted RBP3.19□□□□□ -1.9
CCNT1-203ENST00000550457 DPYSL2Q16555 572 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms