RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 OR2M4Q96R27 311 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 OR2A14Q96R47 310 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 GSDMCQ9BYG8 508 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 AICDAQ9GZX7 198 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ISYNA1Q9NPH2 558 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TIMMDC1Q9NPL8 285 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 C1GALT1Q9NS00 363 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 NMRK1Q9NWW6 199 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 MPP6Q9NZW5 540 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CROTQ9UKG9 612 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ASB4Q9Y574 426 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 A0A096LPK6 155 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CDRT15L2A8MXV6 281 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TTC34A8MYJ7 566 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PLOD3O60568 738 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 E2F6O75461 281 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 LYPD3O95274 346 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PDHA1P08559 390 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 UBTFL6P0CB48 400 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 C1GALT1C1LP0DN25 315 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 GPR143P51810 404 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 DCAF7P61962 342 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PRDX1Q06830 199 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 DLX2Q07687 328 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SNTA1Q13424 505 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PDCD1Q15116 288 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF141Q15928 474 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SLC35F1Q5T1Q4 408 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 UBAP2Q5T6F2 1119 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 C5orf46Q6UWT4 87 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 FAM92BQ6ZTR7 304 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SLCO6A1Q86UG4 719 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PARGQ86W56 976 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 OR2L13Q8N349 312 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 HDDC3Q8N4P3 179 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 LSMEM1Q8N8F7 131 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ARL10Q8N8L6 244 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TCP10LQ8TDR4 215 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 NEURL3Q96EH8 262 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ARHGDIGQ99819 225 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 APOL2Q9BQE5 337 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 LRFN3Q9BTN0 628 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 C10orf88Q9H8K7 445 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 NT5MQ9NPB1 228 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TMEM216Q9P0N5 145 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 KLHL13Q9P2N7 655 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ATXN10Q9UBB4 475 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CGGBP1Q9UFW8 167 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF490Q9ULM2 529 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SNX7Q9UNH6 387 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 A0A1W2PP18 115 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CLDN24A6NM45 220 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 M0QX08 132 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CKMP06732 381 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 THRAP10827 490 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 EPHA8P29322 1005 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 RPA3P35244 121 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 KRT20P35900 424 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 SLC6A11P48066 632 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 RPIAP49247 311 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 RAB28P51157 221 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 ACSM1Q08AH1 577 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CNTN1Q12860 1018 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TMEM115Q12893 351 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 NME3Q13232 169 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CHRNA6Q15825 494 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TMEM177Q53S58 311 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 FCRL6Q6DN72 434 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 GTF2IRD2BQ6EKJ0 949 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 UBE3DQ7Z6J8 389 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 GTF2IRD2Q86UP8 949 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 HEATR4Q86WZ0 1026 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 MEIOBQ8N635 442 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 FAM13CQ8NE31 585 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 ANKRD49Q8WVL7 239 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 BTBD9Q96Q07 612 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 OR2A5Q96R48 311 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 OR4K3Q96R72 315 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CHCHD6Q9BRQ6 235 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PAIP1Q9H074 479 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 MARCH7Q9H992 704 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 EBF2Q9HAK2 575 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TUBA8Q9NY65 449 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PCSK1NQ9UHG2 260 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 RUVBL1Q9Y265 456 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 NCKAP1Q9Y2A7 1128 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 FLVCR1Q9Y5Y0 555 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PRSS21Q9Y6M0 314 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 HYKKA2RU49 373 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 MANBAO00462 879 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 FFAR2O15552 330 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 NSA2O95478 260 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PRAMEF1O95521 474 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 INHBAP08476 426 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 F3P13726 295 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CAPZBP47756 277 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 MECP2P51608 486 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 SLC7A2P52569 658 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 SUCLG1P53597 346 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 RABGGTBP53611 331 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms