RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 RGS6P49758 472 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 CSNK2BP67870 215 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 LMAN2Q12907 356 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 CCSMST1Q4G0I0 132 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 CDKL4Q5MAI5 379 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 PNCKQ6P2M8 343 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 CCBE1Q6UXH8 406 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 GDPD3Q7L5L3 318 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZNF605Q86T29 641 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 HS6ST3Q8IZP7 471 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 WDR20Q8TBZ3 569 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 ATL1Q8WXF7 558 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 FCRL1Q96LA6 429 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 OR5M11Q96RB7 305 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 CCM2Q9BSQ5 444 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 MARCH7Q9H992 704 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 GPATCH2Q9NW75 528 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 C14orf119Q9NWQ9 140 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 MS4A12Q9NXJ0 267 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 STOML2Q9UJZ1 356 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 PCDHGA2Q9Y5H1 932 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 PRRC2BQ5JSZ5 2229 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 TMEM202A6NGA9 273 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 GFYI3L273 518 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 ASNA1O43681 348 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 SOCS5O75159 536 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 IGSF6O95976 241 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 ANXA4P09525 319 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 HNRNPFP52597 415 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 SELENOWP63302 87 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 GPNMBQ14956 572 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 TPRG1Q6ZUI0 275 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 LGI4Q8N135 537 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 CYP4Z2PQ8N1L4 340 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 CPA6Q8N4T0 437 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 GTPBP3Q969Y2 492 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 EFHD2Q96C19 240 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 HOXD1Q9GZZ0 328 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 FKBP14Q9NWM8 211 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 YIPF1Q9Y548 306 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 CCDC88CQ9P219 2028 aa13.61□□□□□ -0.23
RAPGEF3-218ENST00000548919 A6NL46 340 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 OR2AG2A6NM03 316 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 CYP2A7P20853 494 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 CST5P28325 142 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 BMPR1AP36894 532 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 IFITM2Q01629 132 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 NPAS3Q8IXF0 933 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 B3GNT7Q8NFL0 401 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 OR4A15Q8NGL6 344 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 SCRN2Q96FV2 425 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZIC5Q96T25 663 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 NXF2Q9GZY0 626 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 PLCXD1Q9NUJ7 323 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 ACSL6Q9UKU0 697 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 RUVBL1Q9Y265 456 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 IFT52Q9Y366 437 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 UGT2A1Q9Y4X1 527 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 PCDHGB6Q9Y5F9 930 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 PCDHGA3Q9Y5H0 932 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 GNG14A0A1W2PPG7 69 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 NPIPB8E9PQR5 432 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 HAT1O14929 419 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 KMOO15229 486 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 AOC2O75106 756 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 ATP1B2P14415 290 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 CASP3P42574 277 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 MED22Q15528 200 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZNF385BQ569K4 471 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 C10orf62Q5T681 223 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 TUBA3EQ6PEY2 450 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 THOC6Q86W42 341 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 C11orf65Q8NCR3 313 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 OR2AP1Q8NGE2 309 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 SCAMP4Q969E2 229 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 SAMD11Q96NU1 681 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 RRAGCQ9HB90 399 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 SPATA6Q9NWH7 488 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 ERVK13-1Q9NX77 482 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 CFAP20Q9Y6A4 193 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 NINQ8N4C6 2090 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 CTDSP2O14595 271 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 PCDH17O14917 1159 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 KIAA0513O60268 411 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 PRMT3O60678 531 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 PTTG1O95997 202 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 C1SP09871 688 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 GABRB1P18505 474 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 UGT2B15P54855 530 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZNF45Q02386 682 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 CSTF3Q12996 717 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 NAE1Q13564 534 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 GANABQ14697 944 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 TTC23LQ6PF05 361 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms