RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 C2CD4AQ8NCU7 369 aaPredicted RBP19.17■□□□□ 0.66
SSH1-207ENST00000547862 TM4SF19Q96DZ7 209 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 LPAR4Q99677 370 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 ARL15Q9NXU5 204 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 APCP25054 2843 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 NCOA6Q14686 2063 aaPredicted RBP19.16■□□□□ 0.66
SSH1-207ENST00000547862 ZNHIT1O43257 154 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 OR1F1O43749 312 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 GUCA1CO95843 209 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 HIST1H2AGP0C0S8 130 aaPredicted RBP19.16■□□□□ 0.66
SSH1-207ENST00000547862 ESRRAP11474 423 aaPredicted RBP19.16■□□□□ 0.66
SSH1-207ENST00000547862 HIST1H2ADP20671 130 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 EEF1DP29692 281 aaKnown RBP19.16■□□□□ 0.66
SSH1-207ENST00000547862 TAS2R50P59544 299 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 ALDH6A1Q02252 535 aaKnown RBP19.16■□□□□ 0.66
SSH1-207ENST00000547862 PDAP1Q13442 181 aaKnown RBP19.16■□□□□ 0.66
SSH1-207ENST00000547862 USP10Q14694 798 aaKnown RBP19.16■□□□□ 0.66
SSH1-207ENST00000547862 DEFB134Q4QY38 66 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 CYP4X1Q8N118 509 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 KIF2BQ8N4N8 673 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 SLC5A8Q8N695 610 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 GPATCH11Q8N954 259 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 ZNF740Q8NDX6 193 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 MDS2Q8NDY4 140 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 PBKQ96KB5 322 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 HIST1H2AHQ96KK5 128 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 HIST1H2AJQ99878 128 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 H2AFJQ9BTM1 129 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 SGPP1Q9BX95 441 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 RUBCNLQ9H714 662 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 ASIC3Q9UHC3 531 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 NEU2Q9Y3R4 380 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 CACNA1CQ13936 2221 aa19.16■□□□□ 0.66
SSH1-207ENST00000547862 NPIPA5E9PKD4 350 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 B4GALT2O60909 372 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 ZNF888P0CJ79 500 aaPredicted RBP19.15■□□□□ 0.66
SSH1-207ENST00000547862 COX6B1P14854 86 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 CD46P15529 392 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 CCND1P24385 295 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 CD96P40200 585 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 CCR8P51685 355 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 SLC26A5P58743 744 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 ADORA2A-AS1P86434 159 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 CYP1B1Q16678 543 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 RNASEH2BQ5TBB1 312 aaKnown RBP19.15■□□□□ 0.66
SSH1-207ENST00000547862 MTFR2Q6P444 385 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 RPTNQ6XPR3 784 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 NCCRP1Q6ZVX7 275 aaPredicted RBP19.15■□□□□ 0.66
SSH1-207ENST00000547862 GALNTL5Q7Z4T8 443 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 M1APQ8TC57 530 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 GRK7Q8WTQ7 553 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 TSNARE1Q96NA8 513 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 PHF12Q96QT6 1004 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 HAUS8Q9BT25 410 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 SPNS1Q9H2V7 528 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 CDCP1Q9H5V8 836 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 MMP25Q9NPA2 562 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 PPANQ9NQ55 473 aaKnown RBP19.15■□□□□ 0.66
SSH1-207ENST00000547862 LANCL2Q9NS86 450 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 NPIPA1Q9UND3 350 aa19.15■□□□□ 0.66
SSH1-207ENST00000547862 KLF2Q9Y5W3 355 aaPredicted RBP19.15■□□□□ 0.66
SSH1-207ENST00000547862 FBN2P35556 2912 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 DNAJB6O75190 326 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 FHP07954 510 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 GABRB3P28472 473 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 HNF4AP41235 474 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 HERC3Q15034 1050 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.14■□□□□ 0.65
SSH1-207ENST00000547862 BBS9Q3SYG4 887 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 HP1BP3Q5SSJ5 553 aaPredicted RBP19.14■□□□□ 0.65
SSH1-207ENST00000547862 CATSPEREQ5SY80 951 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 H3F3CQ6NXT2 135 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 GDF7Q7Z4P5 450 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 TMEM178AQ8NBL3 297 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 GABPB2Q8TAK5 448 aaPredicted RBP19.14■□□□□ 0.65
SSH1-207ENST00000547862 CFAP36Q96G28 342 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 GPR137Q96N19 417 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 FRMD6Q96NE9 622 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 NAP1L3Q99457 506 aaPredicted RBP19.14■□□□□ 0.65
SSH1-207ENST00000547862 SLC22A7Q9Y694 548 aa19.14■□□□□ 0.65
SSH1-207ENST00000547862 PKDREJQ9NTG1 2253 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 GOLGA6L10A0A0M3HER8 536 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 MAGEB17A8MXT2 336 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 NDC80O14777 642 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 SLC16A5O15375 505 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 NRDCO43847 1150 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 MLYCDO95822 493 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 NPPBP16860 134 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 ELAVL4P26378 380 aaKnown RBP19.13■□□□□ 0.65
SSH1-207ENST00000547862 HSF1Q00613 529 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 RGS1Q08116 209 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 MAPKAPK3Q16644 382 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 SPANXN3Q5MJ09 141 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.13■□□□□ 0.65
SSH1-207ENST00000547862 FAM98AQ8NCA5 519 aaKnown RBP19.13■□□□□ 0.65
SSH1-207ENST00000547862 TBC1D20Q96BZ9 403 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 SCMH1Q96GD3 660 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 OR1F2PQ96R84 312 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 RHBGQ9H310 441 aa19.13■□□□□ 0.65
SSH1-207ENST00000547862 JRKLQ9Y4A0 524 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms