RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ST6GAL1P15907 406 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 EPORP19235 508 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 GRK2P25098 689 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 SERPINB5P36952 375 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 GRIA3P42263 894 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 ARL4DP49703 201 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 CCR8P51685 355 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 TRAF3Q13114 568 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 CHIT1Q13231 466 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 STX3Q13277 289 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 CATSPEREQ5SY80 951 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 NXPE4Q6UWF7 544 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 GPRIN3Q6ZVF9 776 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 ASB18Q6ZVZ8 466 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 PRSS42Q7Z5A4 293 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 CARFQ8N187 725 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 C19orf47Q8N9M1 422 aaKnown RBP11.54□□□□□ -0.56
HDAC7-226ENST00000547259 OR52B6Q8NGF0 335 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 THAP4Q8WY91 577 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 MIB2Q96AX9 1013 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 PTCD3Q96EY7 689 aaKnown RBP11.54□□□□□ -0.56
HDAC7-226ENST00000547259 PRAP1Q96NZ9 151 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 ZNF382Q96SR6 550 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 TRMOQ9BU70 441 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 GPR87Q9BY21 358 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 DRC3Q9H069 523 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 MANSC1Q9H8J5 431 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 EML4Q9HC35 981 aaKnown RBP11.54□□□□□ -0.56
HDAC7-226ENST00000547259 C1GALT1Q9NS00 363 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 SOHLH2Q9NX45 425 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 CROTQ9UKG9 612 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 VPS4AQ9UN37 437 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 SNX7Q9UNH6 387 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 TP53TG5Q9Y2B4 290 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 MAN2B2Q9Y2E5 1009 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 MYO9AB2RTY4 2548 aa11.54□□□□□ -0.56
HDAC7-226ENST00000547259 UTP20O75691 2785 aaKnown RBP11.54□□□□□ -0.56
HDAC7-226ENST00000547259 UNC79Q9P2D8 2635 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 IGKV1-8A0A0C4DH67 115 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 SLC9B1P1A6NJY1 282 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 MAP3K7O43318 606 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 CRCPO75575 148 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 LYPLA1O75608 230 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-226ENST00000547259 CREG1O75629 220 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 KIAA0754O94854 1291 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 CLDN9O95484 217 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 C1GALT1C1LP0DN25 315 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 HRH2P25021 359 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 VARSP26640 1264 aaKnown RBP11.53□□□□□ -0.56
HDAC7-226ENST00000547259 GRK3P35626 688 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 SLC1A6P48664 564 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 SEPHS1P49903 392 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 PKNOX1P55347 436 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 ABCE1P61221 599 aaKnown RBP11.53□□□□□ -0.56
HDAC7-226ENST00000547259 MEF2AQ02078 507 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-226ENST00000547259 GUCY1A3Q02108 690 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 ACY1Q03154 408 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 BST1Q10588 318 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 DOC2AQ14183 400 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 ERV3-1Q14264 604 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 SLBPQ14493 270 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC7-226ENST00000547259 PAGE2BQ5JRK9 111 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 ATG9BQ674R7 924 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 FCRL6Q6DN72 434 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 FIGLAQ6QHK4 219 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 SLCO4C1Q6ZQN7 724 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 MILR1Q7Z6M3 343 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 PAQR7Q86WK9 346 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 KMT5CQ86Y97 462 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 TBC1D19Q8N5T2 526 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 GALNT6Q8NCL4 622 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 OR4F6Q8NGB9 312 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 AGAP11Q8TF27 550 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 CKAP2Q8WWK9 683 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 KLHL6Q8WZ60 621 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 ZNF75CPQ92670 426 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-226ENST00000547259 MAGEB10Q96LZ2 347 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-226ENST00000547259 MAGEB18Q96M61 343 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 TRAPPC9Q96Q05 1148 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 CDK15Q96Q40 435 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 AIF1LQ9BQI0 150 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 EFCAB11Q9BUY7 163 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 SHCBP1LQ9BZQ2 653 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 SPNS1Q9H2V7 528 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 EHD1Q9H4M9 534 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 PRM3Q9NNZ6 103 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 MID1IP1Q9NPA3 183 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 TMEM184CQ9NVA4 438 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 FAM53CQ9NYF3 392 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 RARRES3Q9UL19 164 aa11.53□□□□□ -0.56
HDAC7-226ENST00000547259 G3BP2Q9UN86 482 aaKnown RBP11.53□□□□□ -0.56
HDAC7-226ENST00000547259 MDC1Q14676 2089 aaKnown RBP11.52□□□□□ -0.57
HDAC7-226ENST00000547259 IGHV5-51A0A0C4DH38 117 aa11.52□□□□□ -0.57
HDAC7-226ENST00000547259 PPP6CO00743 305 aa11.52□□□□□ -0.57
HDAC7-226ENST00000547259 KLF11O14901 512 aa11.52□□□□□ -0.57
HDAC7-226ENST00000547259 HAT1O14929 419 aa11.52□□□□□ -0.57
HDAC7-226ENST00000547259 POLR3GO15318 223 aaPredicted RBP11.52□□□□□ -0.57
HDAC7-226ENST00000547259 ITM2AO43736 263 aa11.52□□□□□ -0.57
HDAC7-226ENST00000547259 NRP2O60462 931 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms