RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 A8MX80 341 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 FAM72CH0Y354 149 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 H0YJX3 145 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 H3BNX3 289 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 EPHB6O15197 1021 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 TOX3O15405 576 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 GYG2O15488 501 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 KDELR3O43731 214 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PFDN1O60925 122 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PRLP01236 227 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 FOLR1P15328 257 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 CPEP16870 476 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 TYRP1P17643 537 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 NELFEP18615 380 aaKnown RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 RORAP35398 523 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 SLC1A1P43005 524 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 TSFMP43897 325 aaKnown RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 RPL5P46777 297 aaKnown RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 CAPZBP47756 277 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PPM1FP49593 454 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 RPS15P62841 145 aaKnown RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 OTUD4Q01804 1114 aaKnown RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 TOP3AQ13472 1001 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 TUBB3Q13509 450 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 DCTN2Q13561 401 aaKnown RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PTPRRQ15256 657 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 KYNUQ16719 465 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 ATP13A4Q4VNC1 1196 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 CCDC92Q53HC0 331 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 VWA2Q5GFL6 755 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 FAM72AQ5TYM5 149 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PRAMEF9Q5VWM5 478 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 LYPLAL1Q5VWZ2 237 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 FAM72DQ6L9T8 149 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 TIGD7Q6NT04 549 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 DRICH1Q6PGQ1 229 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 IYDQ6PHW0 289 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 B3GNT6Q6ZMB0 384 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 RFLNAQ6ZTI6 216 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF571Q7Z3V5 609 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 HSD11B1LQ7Z5J1 315 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 STRA8Q7Z7C7 330 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 CLNKQ7Z7G1 428 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PCGF5Q86SE9 256 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 MRGPREQ86SM8 312 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF554Q86TJ5 538 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 FAM72BQ86X60 149 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PLXDC1Q8IUK5 500 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PHYKPLQ8IUZ5 450 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 KBTBD2Q8IY47 623 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 ZBTB8BQ8NAP8 495 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 SLC35G2Q8TBE7 412 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 CCDC110Q8TBZ0 833 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 DENND1AQ8TEH3 1009 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 VPS50Q96JG6 964 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 SLC41A2Q96JW4 573 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 NT5C1BQ96P26 610 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 SMR3AQ99954 134 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 WDR77Q9BQA1 342 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 FAM167BQ9BTA0 163 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 AP1M1Q9BXS5 423 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 FRMD8P1Q9BZ68 369 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 MYLK2Q9H1R3 596 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 MAGEH1Q9H213 219 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 DENND2DQ9H6A0 471 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 ZMAT4Q9H898 229 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PALMDQ9NP74 551 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 EMC7Q9NPA0 242 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 TMEM248Q9NWD8 314 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 SEMA5BQ9P283 1151 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 SNX7Q9UNH6 387 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 TMEM98Q9Y2Y6 226 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 PCDHGB6Q9Y5F9 930 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.39□□□□□ -1.39
CCDC60-205ENST00000546345 CUBNO60494 3623 aa6.39□□□□□ -1.39
CCDC60-205ENST00000546345 ANK3Q12955 4377 aaKnown RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ZANQ9Y493 2812 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 IGHV5-51A0A0C4DH38 117 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 A0A0G2JNJ9 132 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 PCDH17O14917 1159 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 RAMP2O60895 175 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 HAUS5O94927 633 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 SHBGP04278 402 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 EBLN1P0CF75 366 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 F3P13726 295 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 PON1P27169 355 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 TEAD1P28347 426 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 PHBP35232 272 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 RPL21P46778 160 aaKnown RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 FMO5P49326 533 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 IFI35P80217 286 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 GCNT1Q02742 428 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 RAD51Q06609 339 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ABRQ12979 859 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ZBTB17Q13105 803 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 SNX1Q13596 522 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ACOX1Q15067 660 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 CNPY1Q3B7I2 92 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 KBTBD12Q3ZCT8 623 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 PDCD4Q53EL6 469 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms