RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 RAB15P59190 212 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 ST8SIA6P61647 398 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 TARDBPQ13148 414 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■■□□□ 12.4
PCMTD1-208ENST00000544451 SLBPQ14493 270 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 TIMM50Q3ZCQ8 353 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 RAET1GQ6H3X3 334 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 NEK5Q6P3R8 708 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 USP30Q70CQ3 517 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 CELF5Q8N6W0 485 aaKnown RBP12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 OR2AP1Q8NGE2 309 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 CIDECQ96AQ7 238 aaPredicted RBP12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 TRIB3Q96RU7 358 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 MGLLQ99685 303 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 CCM2Q9BSQ5 444 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 EMILIN2Q9BXX0 1053 aa12.77□□□□□ -0.37
PCMTD1-208ENST00000544451 RGPD3A6NKT7 1758 aaPredicted RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 RGPD4Q7Z3J3 1758 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 PLOD3O60568 738 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 CCNB2O95067 398 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 BCHEP06276 602 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 NR2F1P10589 423 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 MRPL28Q13084 256 aaKnown RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 CTF1Q16619 201 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 SPATS1Q496A3 300 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 LIPKQ5VXJ0 399 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 CD300LGQ6UXG3 332 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 USP51Q70EK9 711 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 NPAS3Q8IXF0 933 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 MSRB3Q8IXL7 192 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 TCEANCQ8N8B7 351 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 PAPD5Q8NDF8 572 aaKnown RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 DPF3Q92784 378 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 CPPED1Q9BRF8 314 aaPredicted RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 TBC1D17Q9HA65 648 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 NECTIN3Q9NQS3 549 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 SEMA3GQ9NS98 782 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 RLIMQ9NVW2 624 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 FADS2P1A8MWK0 482 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 SERPINI2O75830 405 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 MAGEA11P43364 429 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 GABARAPL2P60520 117 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 SRP54P61011 504 aaKnown RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 GSTM4Q03013 218 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 IQCCQ4KMZ1 466 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 CCDC80Q76M96 950 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 BCDIN3DQ7Z5W3 292 aaKnown RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 CMTM7Q96FZ5 175 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 SORBS1Q9BX66 1292 aaKnown RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 RPRD1BQ9NQG5 326 aaKnown RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 KLHL1Q9NR64 748 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 SEC14L3Q9UDX4 400 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 TRPS1Q9UHF7 1281 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 IGLV3-10A0A075B6K4 115 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 GLOD5A6NK44 160 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 WWP2O00308 870 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 TSPAN6O43657 245 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 ATP1B2P14415 290 aaPredicted RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 CDK6Q00534 326 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 KRR1Q13601 381 aaKnown RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 C10orf62Q5T681 223 aaPredicted RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 MFSD4BQ5TF39 518 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 SHFQ7M4L6 423 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 TSPYL5Q86VY4 417 aaPredicted RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 CHST14Q8NCH0 376 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 PLD4Q96BZ4 506 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 AP2M1Q96CW1 435 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 IL17FQ96PD4 163 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 TP63Q9H3D4 680 aaPredicted RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 KIAA1522Q9P206 1035 aaPredicted RBP12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 SSR3Q9UNL2 185 aa12.76□□□□□ -0.37
PCMTD1-208ENST00000544451 TLX2O43763 284 aaPredicted RBP12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 SLC16A8O95907 504 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 ELFN1P0C7U0 828 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 ACVR1Q04771 509 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 LMAN2Q12907 356 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 DHRS4L2Q6PKH6 230 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 CRTC1Q6UUV9 634 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 RAB43Q86YS6 212 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 IQCF1Q8N6M8 205 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 IPCEF1Q8WWN9 437 aaPredicted RBP12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 EID2BQ96D98 161 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 ASPNQ9BXN1 380 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 H2AFY2Q9P0M6 372 aaPredicted RBP12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 CRNNQ9UBG3 495 aaPredicted RBP12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 ANGPT4Q9Y264 503 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 PEX16Q9Y5Y5 336 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 SPIN1Q9Y657 262 aaPredicted RBP12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 PIPSLA2A3N6 862 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 SAGE2PA6NJ88 616 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 CDRT1O95170 752 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 PTHP01270 115 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 CAPNS1P04632 268 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 RNF144AP50876 292 aaPredicted RBP12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 RPS26P11Q5JNZ5 115 aaPredicted RBP12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 DDI2Q5TDH0 399 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 GALNT7Q86SF2 657 aa12.75□□□□□ -0.37
PCMTD1-208ENST00000544451 COL21A1Q96P44 957 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms