RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 UBFD1O14562 309 aaKnown RBP12.97□□□□□ -0.33
SP140-213ENST00000543928 FFAR3O14843 346 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 DSCR3O14972 297 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 GPR42O15529 346 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 CLEC3AO75596 197 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 KLK3P07288 261 aaPredicted RBP12.97□□□□□ -0.33
SP140-213ENST00000543928 SERPINA6P08185 405 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 LIPCP11150 499 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 RORAP35398 523 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 EMP3P54852 163 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 PKNOX1P55347 436 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 WDR4P57081 412 aaKnown RBP12.97□□□□□ -0.33
SP140-213ENST00000543928 HYAL2Q12891 473 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 DDX39BQ13838 428 aaKnown RBP12.97□□□□□ -0.33
SP140-213ENST00000543928 MAP7Q14244 749 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 NDUFA9Q16795 377 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 MANEAQ5SRI9 462 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 GARNL3Q5VVW2 1013 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 FAM219BQ5XKK7 198 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 TMEM214Q6NUQ4 689 aaKnown RBP12.97□□□□□ -0.33
SP140-213ENST00000543928 DTX1Q86Y01 620 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 DSELQ8IZU8 1212 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 NLGN4XQ8N0W4 816 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 ARHGEF39Q8N4T4 335 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 DTWD1Q8N5C7 304 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 ESX1Q8N693 406 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 NLGN4YQ8NFZ3 816 aaPredicted RBP12.97□□□□□ -0.33
SP140-213ENST00000543928 SNIP1Q8TAD8 396 aaKnown RBP12.97□□□□□ -0.33
SP140-213ENST00000543928 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 ZCCHC10Q8TBK6 192 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 PROKR1Q8TCW9 393 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 AGAP11Q8TF27 550 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 MR1Q95460 341 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 REPS1Q96D71 796 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 CNDP1Q96KN2 507 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 LRFN5Q96NI6 719 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 GBP5Q96PP8 586 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 MID1IP1Q9NPA3 183 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 TRPS1Q9UHF7 1281 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 TSC22D4Q9Y3Q8 395 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 PCDHGA11Q9Y5H2 935 aa12.97□□□□□ -0.33
SP140-213ENST00000543928 ASPMQ8IZT6 3477 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 FRYQ5TBA9 3013 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 A0A1B0GX78 115 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 DYNC1I1O14576 645 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 ATP8B1O43520 1251 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 NPHS1O60500 1241 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 ESRRBO95718 433 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 CCNYL3P0C7X3 344 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 SERPINB1P30740 379 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 NEK2P51955 445 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 SNRPNP63162 240 aaKnown RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 TGIF1Q15583 401 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 CHI3L2Q15782 390 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 TOR1AIP1Q5JTV8 583 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 FRG2Q64ET8 278 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 ZNF385CQ66K41 422 aaPredicted RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 TTC19Q6DKK2 380 aaPredicted RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 CACNA2D3Q8IZS8 1091 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 METTL27Q8N6F8 245 aaPredicted RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 CDYL2Q8N8U2 506 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 ZNF248Q8NDW4 579 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 HUS1BQ8NHY5 278 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 WDR20Q8TBZ3 569 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 ZNF473Q8WTR7 871 aaKnown RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 KCNE4Q8WWG9 221 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 NKD1Q969G9 470 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 MTFMTQ96DP5 389 aaKnown RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 NAF1Q96HR8 494 aaKnown RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 FRG2BQ96QU4 278 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 MTERF1Q99551 399 aaKnown RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 TRMOQ9BU70 441 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 SHCBP1LQ9BZQ2 653 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 SLC6A16Q9GZN6 736 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 AICDAQ9GZX7 198 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 KLHL31Q9H511 634 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 AKIRIN1Q9H9L7 192 aaPredicted RBP12.96□□□□□ -0.33
SP140-213ENST00000543928 LHX9Q9NQ69 397 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 ADGRE2Q9UHX3 823 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 PADI1Q9ULC6 663 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 FER1L5A0AVI2 2057 aa12.96□□□□□ -0.33
SP140-213ENST00000543928 FREM2Q5SZK8 3169 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 A0A0A6YYC8 382 aaPredicted RBP12.95□□□□□ -0.34
SP140-213ENST00000543928 LRIT2A6NDA9 550 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 URADA6NGE7 173 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 H3BQF6 201 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 I3L1I5 382 aaPredicted RBP12.95□□□□□ -0.34
SP140-213ENST00000543928 FOXS1O43638 330 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 TBX6O95947 436 aaPredicted RBP12.95□□□□□ -0.34
SP140-213ENST00000543928 ENO1P06733 434 aaKnown RBP12.95□□□□□ -0.34
SP140-213ENST00000543928 CAPN1P07384 714 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 ZNF888P0CJ79 500 aaPredicted RBP12.95□□□□□ -0.34
SP140-213ENST00000543928 NEFHP12036 1026 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 ITGAXP20702 1163 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 AGXTP21549 392 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 BGNP21810 368 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 HMOX2P30519 316 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 HNRNPH1P31943 449 aaKnown RBP12.95□□□□□ -0.34
SP140-213ENST00000543928 PIK3CBP42338 1070 aa12.95□□□□□ -0.34
SP140-213ENST00000543928 ATP1A2P50993 1020 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms