RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CDKL4Q5MAI5 379 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TPRG1LQ5T0D9 272 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 GPRC6AQ5T6X5 926 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SYT6Q5T7P8 510 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ATPAF1Q5TC12 328 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 FAM46CQ5VWP2 391 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RNF219Q5W0B1 726 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 MBLAC2Q68D91 279 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 IL31Q6EBC2 164 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 XAF1Q6GPH4 301 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 MSANTD2Q6P1R3 559 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ABHD17CQ6PCB6 329 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 HACD2Q6Y1H2 254 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 C16orf59Q7L2K0 433 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SHFQ7M4L6 423 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PAGE2Q7Z2X7 111 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SMIM15Q7Z3B0 74 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 P4HA3Q7Z4N8 544 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 DCXRQ7Z4W1 244 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PLEKHH3Q7Z736 793 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 IQCHQ86VS3 1027 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 P2RY8Q86VZ1 359 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TPRA1Q86W33 373 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 MICU3Q86XE3 530 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RFX6Q8HWS3 928 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 UNC5BQ8IZJ1 945 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 OR8H3Q8N146 312 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 LILRA2Q8N149 483 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CBARPQ8N350 705 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 C9orf62Q8N4C0 152 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF561Q8N587 486 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TMEM52Q8NDY8 209 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 FAM46DQ8NEK8 389 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ZMIZ2Q8NF64 920 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 BHLHE22Q8NFJ8 381 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 OR52N2Q8NGI0 321 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 NANPQ8TBE9 248 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 POC1BQ8TC44 478 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 NSUN6Q8TEA1 469 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 DTD1Q8TEA8 209 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 GLYATL2Q8WU03 294 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TCTEX1D2Q8WW35 142 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TNFRSF14Q92956 283 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SIPA1Q96FS4 1042 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 AURKBQ96GD4 344 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CENPNQ96H22 339 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 FAM84AQ96KN4 292 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 Q96MT0 163 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TEPSINQ96N21 525 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 WFIKKN1Q96NZ8 548 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 KLHL5Q96PQ7 755 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 IL12RB2Q99665 862 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 VRK1Q99986 396 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 C19orf43Q9BQ61 176 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TMEM175Q9BSA9 504 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 EDEM2Q9BV94 578 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 FAM126AQ9BYI3 521 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CPEB1Q9BZB8 566 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 DERL2Q9GZP9 239 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 LHPPQ9H008 270 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 HDHD2Q9H0R4 259 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SDCBP2Q9H190 292 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 C12orf65Q9H3J6 166 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TMPRSS5Q9H3S3 457 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ASB7Q9H672 318 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ESRP2Q9H6T0 727 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 RNF121Q9H920 327 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CARS2Q9HA77 564 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CERS4Q9HA82 394 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 FOLH1BQ9HBA9 442 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SERINC1Q9NRX5 453 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PLSCR3Q9NRY6 295 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 AGPAT3Q9NRZ7 376 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 C1orf112Q9NSG2 853 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 FAM120CQ9NX05 1096 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ARMCX1Q9P291 453 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TMEM181Q9P2C4 612 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SLC17A7Q9P2U7 560 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SEC14L4Q9UDX3 406 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 GIMAP2Q9UG22 337 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 APOBEC3BQ9UH17 382 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SARDHQ9UL12 918 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 CA14Q9ULX7 337 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 MAGED2Q9UNF1 606 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SSR3Q9UNL2 185 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 KCNJ14Q9UNX9 436 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SHOC2Q9UQ13 582 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 SLC5A6Q9Y289 635 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PLEKHA6Q9Y2H5 1048 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 DHRS7Q9Y394 339 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 HSPB11Q9Y547 144 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PCDHGB5Q9Y5G0 923 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 PCDHGA9Q9Y5G4 932 aaKnown RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 LYVE1Q9Y5Y7 322 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 ALG5Q9Y673 324 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 MYH4Q9Y623 1939 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 C4AP0C0L4 1744 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 C4BP0C0L5 1744 aa4.2□□□□□ -1.74
SNHG1-219ENST00000542112 COL5A3P25940 1745 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-219ENST00000542112 TJP1Q07157 1748 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms