RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MAP4K5Q9Y4K4 846 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 CHD6Q8TD26 2715 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 IQANK1A0A1B0GTG1 560 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 ZNF860A6NHJ4 632 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 LRRC14BA6NHZ5 514 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 A6NL46 340 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 SMIM23A6NLE4 172 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 VSTM2BA6NLU5 285 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 H0YIG0 161 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 MKRN2OSH3BPM6 223 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 GOLGA8RI6L899 631 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 K7EPI3 171 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 PRAMEF4O60810 478 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 RDH16O75452 317 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 C1QL1O75973 258 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 KLHL18O94889 574 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 NSA2O95478 260 aaKnown RBP8.75□□□□□ -1.01
SNHG1-215ENST00000540904 ZNF888P0CJ79 500 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-215ENST00000540904 COL6A2P12110 1019 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 EPB42P16452 691 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 MMP11P24347 488 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 CXCR2P25025 360 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 SLCO1A2P46721 670 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 CCL11P51671 97 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 RRADP55042 308 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 IRF8Q02556 426 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 DOC2AQ14183 400 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 HERC3Q15034 1050 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 RBBP7Q16576 425 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 DEFB134Q4QY38 66 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 PRAMEF9Q5VWM5 478 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 TMIGD1Q6UXZ0 262 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 TIFABQ6ZNK6 161 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 MED25Q71SY5 747 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 ABHD13Q7L211 337 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 PPP1R32Q7Z5V6 425 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 LAPTM4BQ86VI4 370 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 PDSS2Q86YH6 399 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 APLFQ8IW19 511 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-215ENST00000540904 TEX9Q8N6V9 391 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 TMEM102Q8N9M5 508 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-215ENST00000540904 C9orf43Q8TAL5 461 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-215ENST00000540904 NT5CQ8TCD5 201 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 CCT6BQ92526 530 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 PHF21BQ96EK2 531 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 PTCD3Q96EY7 689 aaKnown RBP8.75□□□□□ -1.01
SNHG1-215ENST00000540904 IP6K3Q96PC2 410 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 SLC25A18Q9H1K4 315 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 EHD1Q9H4M9 534 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 MKKSQ9NPJ1 570 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-215ENST00000540904 ZNF71Q9NQZ8 489 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-215ENST00000540904 SEMA3GQ9NS98 782 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 C14orf105Q9NVL8 296 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 P4HTMQ9NXG6 502 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 XPR1Q9UBH6 696 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 TUBD1Q9UJT1 453 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 C3orf18Q9UK00 162 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 ANGPTL3Q9Y5C1 460 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 SLC22A7Q9Y694 548 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 FAM208BQ5VWN6 2430 aa8.75□□□□□ -1.01
SNHG1-215ENST00000540904 IGLV3-12A0A075B6K2 115 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 URADA6NGE7 173 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 ANKDD1BA6NHY2 528 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 IDSB3KWA1 339 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 AGPSO00116 658 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 MASP2O00187 686 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 KLK8O60259 260 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 SMIM24O75264 130 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 JRKO75564 520 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 SIX3O95343 332 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 B3GALT4O96024 378 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 SERPINA6P08185 405 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 ALOX12P18054 663 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 CD22P20273 847 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 EEF1DP29692 281 aaKnown RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 HSD17B3P37058 310 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 XCR1P46094 333 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 EMP2P54851 167 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 RAB8AP61006 207 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 STXBP1P61764 594 aaKnown RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 HYAL2Q12891 473 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 NFATC3Q12968 1075 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 CHIT1Q13231 466 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 HIST2H2ACQ16777 129 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 ERCC6LQ2NKX8 1250 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 PAGE2BQ5JRK9 111 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 TOR1AIP1Q5JTV8 583 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 DCAF10Q5QP82 559 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 MFSD4BQ5TF39 518 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 HIST2H2AA3Q6FI13 130 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 FAAH2Q6GMR7 532 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 ADNP2Q6IQ32 1131 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 WDR93Q6P2C0 686 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 KIRREL2Q6UWL6 708 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 MYLK4Q86YV6 388 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 ZC3H7AQ8IWR0 971 aaKnown RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 SHISA5Q8N114 240 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 ZNF843Q8N446 348 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 AFAP1L2Q8N4X5 818 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 PTGR2Q8N8N7 351 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms