RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 LAIR2Q6ISS4 152 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 LCTLQ6UWM7 567 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 FAM83HQ6ZRV2 1179 aaPredicted RBP17.22■□□□□ 0.35
GNE-204ENST00000539208 CEP68Q76N32 757 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 VTCN1Q7Z7D3 282 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 UBE2Q1Q7Z7E8 422 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 ADGRD2Q7Z7M1 963 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 PDZD3Q86UT5 571 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 MMAAQ8IVH4 418 aaKnown RBP17.22■□□□□ 0.35
GNE-204ENST00000539208 SPARTQ8N0X7 666 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 OR4A15Q8NGL6 344 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 SUSD6Q92537 303 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 ZNF566Q969W8 418 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 MAGED4Q96JG8 741 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 COG8Q96MW5 612 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 MTIF3Q9H2K0 278 aaKnown RBP17.22■□□□□ 0.35
GNE-204ENST00000539208 PRM3Q9NNZ6 103 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 BCKDKO14874 412 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 FKBP9O95302 570 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 FURINP09958 794 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 CCDC159P0C7I6 412 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 MYOGP15173 224 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 EFNA1P20827 205 aaPredicted RBP17.21■□□□□ 0.35
GNE-204ENST00000539208 DAPP51397 102 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 TMBIM6P55061 237 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 TSTA3Q13630 321 aaPredicted RBP17.21■□□□□ 0.35
GNE-204ENST00000539208 KEAP1Q14145 624 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 ZNF385BQ569K4 471 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 FAM71E1Q6IPT2 247 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 CRTC3Q6UUV7 619 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 SFTPA1Q8IWL2 248 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 C11orf65Q8NCR3 313 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 SETD9Q8NE22 299 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 C16orf78Q8WTQ4 265 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 FGF13Q92913 245 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 C7orf34Q96L11 122 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 FANCEQ9HB96 536 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 ADPRHL2Q9NX46 363 aa17.21■□□□□ 0.35
GNE-204ENST00000539208 KLHL18O94889 574 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 TGFB1P01137 390 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 PTX3P26022 381 aaPredicted RBP17.21■□□□□ 0.34
GNE-204ENST00000539208 RXRGP48443 463 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 MVDP53602 400 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 GPM6BQ13491 265 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 GALNT10Q86SR1 603 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 HORMAD1Q86X24 394 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 GAB3Q8WWW8 586 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 BARD1Q99728 777 aaKnown RBP17.21■□□□□ 0.34
GNE-204ENST00000539208 GDE1Q9NZC3 331 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 THAP10Q9P2Z0 257 aaPredicted RBP17.21■□□□□ 0.34
GNE-204ENST00000539208 FAF1Q9UNN5 650 aaPredicted RBP17.21■□□□□ 0.34
GNE-204ENST00000539208 NAALAD2Q9Y3Q0 740 aa17.21■□□□□ 0.34
GNE-204ENST00000539208 hCG_2039718K7EN88 272 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 M0QX08 132 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 GPR37L1O60883 481 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 JRKO75564 520 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 ATE1O95260 518 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 NUDT7P0C024 238 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 ERGP11308 486 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 FSHRP23945 695 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 IL12RB1P42701 662 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 CRYBA2P53672 197 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 ELOAQ14241 798 aaKnown RBP17.2■□□□□ 0.34
GNE-204ENST00000539208 ARHGAP19Q14CB8 494 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 PRAMEF14Q5SWL7 426 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 PRAMEF13Q5VWM6 474 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 PNCKQ6P2M8 343 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 IKBIPQ70UQ0 350 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 AMZ2Q86W34 360 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 DCUN1D3Q8IWE4 304 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 NAGSQ8N159 534 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 PLA2G15Q8NCC3 412 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 WDR48Q8TAF3 677 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 SPNS1Q9H2V7 528 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 OR51B5Q9H339 312 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 SFXN1Q9H9B4 322 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 PRSS16Q9NQE7 514 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 ASF1AQ9Y294 204 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 PADI2Q9Y2J8 665 aa17.2■□□□□ 0.34
GNE-204ENST00000539208 DNMT3AQ9Y6K1 912 aaPredicted RBP17.2■□□□□ 0.34
GNE-204ENST00000539208 A0A1B0GVG6 124 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 TBC1D3BA6NDS4 549 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 MYO1GB0I1T2 1018 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 SLC1A7O00341 560 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 SUV39H1O43463 412 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 MITFO75030 526 aaPredicted RBP17.19■□□□□ 0.34
GNE-204ENST00000539208 DNAJB5O75953 348 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 HBA1P69905 142 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 KCNJ10P78508 379 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 RBBP4Q09028 425 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 C2orf80Q0P641 193 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 CNTN1Q12860 1018 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 CDK5R2Q13319 367 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.19■□□□□ 0.34
GNE-204ENST00000539208 FAM46CQ5VWP2 391 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 GTF2IRD2BQ6EKJ0 949 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 GTF2IRD2Q86UP8 949 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 FAM129CQ86XR2 697 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 KRT78Q8N1N4 520 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 OR52N2Q8NGI0 321 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms