RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 NDOR1Q9UHB4 597 aa12.89□□□□□ -0.35
RPAIN-205ENST00000536255 CDC14AQ9UNH5 594 aa12.89□□□□□ -0.35
RPAIN-205ENST00000536255 RUVBL1Q9Y265 456 aaKnown RBP12.89□□□□□ -0.35
RPAIN-205ENST00000536255 ASB1Q9Y576 335 aa12.89□□□□□ -0.35
RPAIN-205ENST00000536255 SPTBP11277 2137 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 CDC14CA4D256 554 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 URADA6NGE7 173 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 ANKDD1BA6NHY2 528 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PRPF4O43172 522 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPAIN-205ENST00000536255 NDUFS4O43181 175 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 LCMT2O60294 686 aaKnown RBP12.88□□□□□ -0.35
RPAIN-205ENST00000536255 DLX3O60479 287 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PLIN3O60664 434 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PROCP04070 461 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 RPS17P08708 135 aaKnown RBP12.88□□□□□ -0.35
RPAIN-205ENST00000536255 ARL1P40616 181 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-205ENST00000536255 HNF4AP41235 474 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 CCR10P46092 362 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 CCNG1P51959 295 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 POLE2P56282 527 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 HERVK_113P63132 956 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 SKP1P63208 163 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 IL10RAQ13651 578 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-205ENST00000536255 FAM53BQ14153 422 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 DOC2AQ14183 400 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 CASP8Q14790 479 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 HKDC1Q2TB90 917 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 LIPJQ5W064 366 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PRMT9Q6P2P2 845 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 ZYG11AQ6WRX3 759 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 GOLGA7Q7Z5G4 137 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 BANPQ8N9N5 519 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 APOBEC4Q8WW27 367 aaKnown RBP12.88□□□□□ -0.35
RPAIN-205ENST00000536255 TM4SF19Q96DZ7 209 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PGM2Q96G03 612 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PKNOX2Q96KN3 472 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 MAGEB10Q96LZ2 347 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-205ENST00000536255 C1QTNF3Q9BXJ4 246 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 ERVK-6Q9BXR3 956 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 SEMA4CQ9C0C4 833 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 DRC3Q9H069 523 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 SPNS1Q9H2V7 528 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 IPPKQ9H8X2 491 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 ACTR8Q9H981 624 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 COPG2Q9UBF2 871 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 GPN3Q9UHW5 284 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PCTPQ9UKL6 214 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 TCFL5Q9UL49 500 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 POLHQ9Y253 713 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 PLLPQ9Y342 182 aa12.88□□□□□ -0.35
RPAIN-205ENST00000536255 ATRXP46100 2492 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 LRRC14BA6NHZ5 514 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 C1QL1O75973 258 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 WFS1O76024 890 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 SUPT7LO94864 414 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 OTCP00480 354 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 SERPIND1P05546 499 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 EPORP19235 508 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 IMPDH1P20839 514 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 SERPINB1P30740 379 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 PRKAA2P54646 552 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 E2F2Q14209 437 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 NKAIN1Q4KMZ8 207 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 GRHL2Q6ISB3 625 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 NIPAL1Q6NVV3 410 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 MED27Q6P2C8 311 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-205ENST00000536255 ZNF740Q8NDX6 193 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 REPS1Q96D71 796 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 C10orf90Q96M02 699 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 ADNPQ9H2P0 1102 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 NOL11Q9H8H0 719 aaKnown RBP12.87□□□□□ -0.35
RPAIN-205ENST00000536255 IFT80Q9P2H3 777 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-205ENST00000536255 ADGRE2Q9UHX3 823 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 EMCNQ9ULC0 261 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 STK38LQ9Y2H1 464 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 PADI2Q9Y2J8 665 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 ACTL7BQ9Y614 415 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 KCNMB2Q9Y691 235 aa12.87□□□□□ -0.35
RPAIN-205ENST00000536255 SEC16AO15027 2179 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 PIEZO2Q9H5I5 2752 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 P2RX6O15547 441 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 CLEC3AO75596 197 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 CLDN9O95484 217 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 MLYCDO95822 493 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SERPINA6P08185 405 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SFTPCP11686 197 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 CPA3P15088 417 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 H2AFXP16104 143 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ITGAXP20702 1163 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 AVPR1BP47901 424 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 STXBP1P61764 594 aaKnown RBP12.86□□□□□ -0.35
RPAIN-205ENST00000536255 PHEXP78562 749 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ASPHQ12797 758 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SLC9A5Q14940 896 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 HERC3Q15034 1050 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms