RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CETN1Q12798 172 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 KLF1Q13351 362 aaPredicted RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PKP1Q13835 747 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NFE2L1Q14494 772 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 MEA1Q16626 185 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 DEFB113Q30KQ7 82 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NKAIN1Q4KMZ8 207 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TFDP3Q5H9I0 405 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NAA35Q5VZE5 725 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SPINK14Q6IE38 97 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 KLHL10Q6JEL2 608 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 HMBOX1Q6NT76 420 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TRIM65Q6PJ69 517 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TMEM220Q6QAJ8 160 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 KRBA2Q6ZNG9 492 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 C16orf47Q6ZP98 133 aaPredicted RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 Q6ZPB1 254 aaPredicted RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 KMT5CQ86Y97 462 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 ZDHHC17Q8IUH5 632 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 LIX1LQ8IVB5 337 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM71AQ8IYT1 594 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM98AQ8NCA5 519 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TMEM35BQ8NCS4 154 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 OR11G2Q8NGC1 345 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 OR8K5Q8NH50 307 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 LILRB4Q8NHJ6 448 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 HAS2Q92819 552 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 HDAC10Q969S8 669 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 MAGED4Q96JG8 741 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PKNOX2Q96KN3 472 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 GPR137Q96N19 417 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 AGAP3Q96P47 875 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 IP6K3Q96PC2 410 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PSKH2Q96QS6 385 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NUDCD1Q96RS6 583 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PCDHB18PQ96TA0 734 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TSG101Q99816 390 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 C11orf70Q9BRQ4 267 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TRIM51Q9BSJ1 452 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SPATA16Q9BXB7 569 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 RAB33BQ9H082 229 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 WWP1Q9H0M0 922 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CARD9Q9H257 536 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 EPS8L2Q9H6S3 715 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 ZMAT4Q9H898 229 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 RMI1Q9H9A7 625 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 UGT1A7Q9HAW7 530 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 UGT1A10Q9HAW8 530 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 UGT1A8Q9HAW9 530 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 BPIFA1Q9NP55 256 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NT5MQ9NPB1 228 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SIX2Q9NPC8 291 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 KLHL1Q9NR64 748 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 IMP3Q9NV31 184 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TBCCD1Q9NVR7 557 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 STMN3Q9NZ72 180 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 IL17CQ9P0M4 197 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 VPS18Q9P253 973 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CTSFQ9UBX1 484 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PCSK1NQ9UHG2 260 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC24A2Q9UI40 661 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NOCTQ9UK39 431 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 RCOR1Q9UKL0 485 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SHOC2Q9UQ13 582 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 HPSEQ9Y251 543 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PADI2Q9Y2J8 665 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PPIL1Q9Y3C6 166 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 MAU2Q9Y6X3 613 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 MGAM2Q2M2H8 2515 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 C1orf232A0A0U1RR37 186 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 A0A1B0GTH9 108 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 A0A1W2PPR1 153 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 A0A1W2PR48 441 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 DYTNA2CJ06 578 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 GSAPA4D1B5 854 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 OR2W5A6NFC9 320 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 DNAJC9-AS1A6NH13 148 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 OR2AG2A6NM03 316 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 A8MUI8 341 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 E9PLN8 166 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 EEF2KO00418 725 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 BTN3A1O00481 513 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 KMOO15229 486 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 P4HA2O15460 535 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 ASNA1O43681 348 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 KLK8O60259 260 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 KLHL41O60662 606 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CRLF1O75462 422 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RBMXL2O75526 392 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 OR2B3O76000 313 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PDE9AO76083 593 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 SEC24DO94855 1032 aaPredicted RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CDK14O94921 469 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 MATN4O95460 622 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 IGHEP01854 428 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PRR35P0CG20 571 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 TPBGLP0DKB5 382 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 KRT3P12035 628 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 ABOP16442 354 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 MCM3P25205 808 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms