RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CRYBA2P53672 197 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 GNG2P59768 71 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 PTSQ03393 145 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 CHRNEQ04844 493 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 LMAN2Q12907 356 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 ELAVL2Q12926 359 aaKnown RBP18.64■□□□□ 0.57
CAPN1-226ENST00000533820 TIGD6Q17RP2 521 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 CCSMST1Q4G0I0 132 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 SPOUT1Q5T280 376 aaKnown RBP18.64■□□□□ 0.57
CAPN1-226ENST00000533820 NLGN4XQ8N0W4 816 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 LILRA3Q8N6C8 439 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-226ENST00000533820 CHCHD6Q9BRQ6 235 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 GNG14A0A1W2PPG7 69 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 TMEM202A6NGA9 273 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 E7EQ34 232 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 SUV39H1O43463 412 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 ALX3O95076 343 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 GPR33Q49SQ1 333 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 EIF3MQ7L2H7 374 aaKnown RBP18.64■□□□□ 0.57
CAPN1-226ENST00000533820 SLC5A8Q8N695 610 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 C1orf52Q8N6N3 182 aaKnown RBP18.64■□□□□ 0.57
CAPN1-226ENST00000533820 RHOXF1Q8NHV9 184 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 ITPAQ9BY32 194 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 OR51E2Q9H255 320 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 SAP18O00422 153 aaKnown RBP18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ASNA1O43681 348 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 SCN2BO60939 215 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 CKMP06732 381 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 OR56A5P0C7T3 313 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 MSL3P1P0C860 447 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ALOX12P18054 663 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 GAB1Q13480 694 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 GPNMBQ14956 572 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 PROX2Q3B8N5 592 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 SLC8B1Q6J4K2 584 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ZNF852Q6ZMS4 543 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 CBLL1Q75N03 491 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 CCDC103Q8IW40 242 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ADAMTS19Q8TE59 1207 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 PHF10Q8WUB8 498 aaKnown RBP18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ASB11Q8WXH4 323 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 Q96MT0 163 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 DUSP26Q9BV47 211 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 SLC12A9Q9BXP2 914 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 VPS29Q9UBQ0 182 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ZMAT5Q9UDW3 170 aaKnown RBP18.63■□□□□ 0.57
CAPN1-226ENST00000533820 IGSF6O95976 241 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 C9P02748 559 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 CDH12P55289 794 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 SMARCB1Q12824 385 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 NAE1Q13564 534 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 SUZ12Q15022 739 aaKnown RBP18.63■□□□□ 0.57
CAPN1-226ENST00000533820 RSBN1Q5VWQ0 802 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-226ENST00000533820 BBS7Q8IWZ6 715 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 MRPL9Q9BYD2 267 aaKnown RBP18.63■□□□□ 0.57
CAPN1-226ENST00000533820 GABARAPL1Q9H0R8 117 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ZNF334Q9HCZ1 680 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-226ENST00000533820 MYO7AQ13402 2215 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 GABRR3A8MPY1 467 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 M0R082 166 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 NUAK1O60285 661 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ZNF821O75541 412 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ALOX5P09917 674 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 SPNP16150 400 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 GPX2P18283 190 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 FAM214AQ32MH5 1076 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 PLEKHG6Q3KR16 790 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ZNF404Q494X3 552 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 STEAP3Q658P3 488 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 LRRC70Q7Z2Q7 622 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 SLC38A4Q969I6 547 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 COQ3Q9NZJ6 369 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 ACSL6Q9UKU0 697 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 TMPRSS11EQ9UL52 423 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 SNX8Q9Y5X2 465 aa18.63■□□□□ 0.57
CAPN1-226ENST00000533820 CCDC88CQ9P219 2028 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 PRKACAP17612 351 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 PPP3CCP48454 512 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 COX20Q5RI15 118 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 DEFB128Q7Z7B8 93 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 TMEM150AQ86TG1 271 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 NPAS4Q8IUM7 802 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 CMTM8Q8IZV2 173 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 DNAJB8Q8NHS0 232 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 C2orf15Q8WU43 125 aaKnown RBP18.62■□□□□ 0.57
CAPN1-226ENST00000533820 OMA1Q96E52 524 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 J3KTA2 159 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 TNFRSF11BO00300 401 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 TLL1O43897 1013 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 ANXA4P09525 319 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-226ENST00000533820 ETFAP13804 333 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 IL1RNP18510 177 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 PBLDP30039 288 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-226ENST00000533820 EIF2DP41214 584 aaKnown RBP18.62■□□□□ 0.57
CAPN1-226ENST00000533820 PREPP48147 710 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 PPP5CP53041 499 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 CXCR4P61073 352 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 DOC2AQ14183 400 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 VEPH1Q14D04 833 aa18.62■□□□□ 0.57
CAPN1-226ENST00000533820 FAM124AQ86V42 546 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms