RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 KCNE1BA0A087WTH5 132 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 MAGEB17A8MXT2 336 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 FOXO6A8MYZ6 492 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 KLRC4-KLRK1H3BQV0 150 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 CHST10O43529 356 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 TOXO94900 526 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 HOXB4P17483 251 aaPredicted RBP12.22□□□□□ -0.45
COPB1-209ENST00000533096 ARNTP27540 789 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 ATP5DP30049 168 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 CHRNB4P30926 498 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 NR0B1P51843 470 aaKnown RBP12.22□□□□□ -0.45
COPB1-209ENST00000533096 BTG2P78543 158 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 GBX1Q14549 363 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 OASLQ15646 514 aaKnown RBP12.22□□□□□ -0.45
COPB1-209ENST00000533096 TTLL9Q3SXZ7 439 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 CASC4Q6P4E1 433 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 UBE2R2Q712K3 238 aaPredicted RBP12.22□□□□□ -0.45
COPB1-209ENST00000533096 GSTA5Q7RTV2 222 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 ZNF227Q86WZ6 799 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 LRRC56Q8IYG6 542 aaPredicted RBP12.22□□□□□ -0.45
COPB1-209ENST00000533096 ASB11Q8WXH4 323 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 TCF12Q99081 682 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 DEFB126Q9BYW3 111 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 ATG10Q9H0Y0 220 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 GSX1Q9H4S2 264 aaPredicted RBP12.22□□□□□ -0.45
COPB1-209ENST00000533096 SYBUQ9NX95 663 aa12.22□□□□□ -0.45
COPB1-209ENST00000533096 BTNL10A8MVZ5 291 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 NPIPA2E9PIF3 369 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 NPIPA3F8WFD2 350 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 SLC16A5O15375 505 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 TFEBP19484 476 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 IMPA1P29218 277 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 HNF4AP41235 474 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 HLCSP50747 726 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 CLCN7P51798 805 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 MLF1P58340 268 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 PPP2R2AP63151 447 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 MEF2AQ02078 507 aaPredicted RBP12.21□□□□□ -0.45
COPB1-209ENST00000533096 SNTB1Q13884 538 aaKnown RBP12.21□□□□□ -0.45
COPB1-209ENST00000533096 DEFB134Q4QY38 66 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 RNF187Q5TA31 235 aaPredicted RBP12.21□□□□□ -0.45
COPB1-209ENST00000533096 SEL1L2Q5TEA6 688 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 NEPROQ6NW34 567 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 CYHR1Q6ZMK1 362 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 CENPUQ71F23 418 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 DMRTC2Q8IXT2 367 aaPredicted RBP12.21□□□□□ -0.45
COPB1-209ENST00000533096 TMEM156Q8N614 296 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 ACBD4Q8NC06 268 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 OR52N2Q8NGI0 321 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 OR5M9Q8NGP3 310 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 ELP5Q8TE02 316 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 TBC1D20Q96BZ9 403 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 TM4SF19Q96DZ7 209 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 PWWP2AQ96N64 755 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 TREX2Q9BQ50 279 aaPredicted RBP12.21□□□□□ -0.45
COPB1-209ENST00000533096 CCDC68Q9H2F9 335 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 LIME1Q9H400 295 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 CCDC177Q9NQR7 707 aaPredicted RBP12.21□□□□□ -0.45
COPB1-209ENST00000533096 LANCL2Q9NS86 450 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 FBXW2Q9UKT8 454 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 SH2B3Q9UQQ2 575 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 KLF13Q9Y2Y9 288 aaPredicted RBP12.21□□□□□ -0.45
COPB1-209ENST00000533096 CCDC168Q8NDH2 2452 aa12.21□□□□□ -0.45
COPB1-209ENST00000533096 PKDREJQ9NTG1 2253 aa12.21□□□□□ -0.46
COPB1-209ENST00000533096 GFYI3L273 518 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 OR1F1O43749 312 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 KIF5CO60282 957 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 AVILO75366 819 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 FHP07954 510 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 CYC1P08574 325 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 HOXD4P09016 255 aaPredicted RBP12.2□□□□□ -0.46
COPB1-209ENST00000533096 KLK2P20151 261 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 HRH2P25021 359 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 GRK3P35626 688 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 NUP107P57740 925 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 PLGLB1Q02325 96 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 KIF5AQ12840 1032 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 CTBP1Q13363 440 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 NAE1Q13564 534 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 THOC5Q13769 683 aaKnown RBP12.2□□□□□ -0.46
COPB1-209ENST00000533096 CEBPEQ15744 281 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 GXYLT1Q4G148 440 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 CMPK2Q5EBM0 449 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 PIWIL4Q7Z3Z4 852 aaKnown RBP12.2□□□□□ -0.46
COPB1-209ENST00000533096 SLC13A5Q86YT5 568 aaPredicted RBP12.2□□□□□ -0.46
COPB1-209ENST00000533096 LGI4Q8N135 537 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 POGLUT1Q8NBL1 392 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 FBXO15Q8NCQ5 510 aaPredicted RBP12.2□□□□□ -0.46
COPB1-209ENST00000533096 OR5M3Q8NGP4 307 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 THAP11Q96EK4 314 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 KIFC1Q9BW19 673 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 TP63Q9H3D4 680 aaPredicted RBP12.2□□□□□ -0.46
COPB1-209ENST00000533096 FBXO6Q9NRD1 293 aaPredicted RBP12.2□□□□□ -0.46
COPB1-209ENST00000533096 DNAJB12Q9NXW2 375 aaKnown RBP12.2□□□□□ -0.46
COPB1-209ENST00000533096 ALKBH4Q9NXW9 302 aa12.2□□□□□ -0.46
COPB1-209ENST00000533096 TCRBV7S3A2A0A539 114 aa12.19□□□□□ -0.46
COPB1-209ENST00000533096 FCHO1O14526 889 aa12.19□□□□□ -0.46
COPB1-209ENST00000533096 MPC1LP0DKB6 136 aa12.19□□□□□ -0.46
COPB1-209ENST00000533096 CDH1P12830 882 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms