RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CHRM5P08912 532 aaPredicted RBP13.79□□□□□ -0.2
TTC39A-216ENST00000530004 ACPPP15309 386 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 SDC1P18827 310 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 CXCR2P25025 360 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 PIK3CBP42338 1070 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 GPR3P46089 330 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 REEP5Q00765 189 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 ACSM2AQ08AH3 577 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 TIGD2Q4W5G0 525 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 ACSM2BQ68CK6 577 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 ADCK2Q7Z695 626 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 FAM20CQ8IXL6 584 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.79□□□□□ -0.2
TTC39A-216ENST00000530004 OR4K1Q8NGD4 311 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 CLHC1Q8NHS4 586 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 NETO1Q8TDF5 533 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 METTL2AQ96IZ6 378 aaKnown RBP13.79□□□□□ -0.2
TTC39A-216ENST00000530004 ZBTB18Q99592 522 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 EBPLQ9BY08 206 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 SRMSQ9H3Y6 488 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 SLC7A8Q9UHI5 535 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 PRPF19Q9UMS4 504 aaKnown RBP13.79□□□□□ -0.2
TTC39A-216ENST00000530004 IGKV1-8A0A0C4DH67 115 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 FEZF1A0PJY2 475 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 FAM221BA6H8Z2 402 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ASPDHA6ND91 283 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ISM1B1AKI9 464 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 MGRN1O60291 552 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 PDE5AO76074 875 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 TGFB1P01137 390 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ACP1P24666 158 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ALDH4A1P30038 563 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 EPHA4P54764 986 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 CSNK1G2P78368 415 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 SF1Q15637 639 aaKnown RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 COQ5Q5HYK3 327 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 PERM1Q5SV97 790 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 BNC2Q6ZN30 1099 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 KRTCAP2Q8N6L1 136 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 C1orf52Q8N6N3 182 aaKnown RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 OR2L3Q8NG85 312 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 NUDT8Q8WV74 236 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 TSSK3Q96PN8 268 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 CDC6Q99741 560 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 OR51B5Q9H339 312 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 DENND2DQ9H6A0 471 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 MRPS30Q9NP92 439 aaKnown RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 NMRK1Q9NWW6 199 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 MAP10Q9P2G4 905 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 RUVBL1Q9Y265 456 aaKnown RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 TSC22D4Q9Y3Q8 395 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 FAM186AA6NE01 2351 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ANKDD1BA6NHY2 528 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 B4GAT1O43505 415 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 CIB2O75838 187 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 MYO1DO94832 1006 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 UBXN7O94888 489 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 CCNDBP1O95273 360 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 TACR1P25103 407 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 OR1D5P58170 312 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 PSME3P61289 254 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ABATP80404 500 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 SPIN4Q56A73 249 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 PGM2L1Q6PCE3 622 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 HACD2Q6Y1H2 254 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 VN1R5Q7Z5H4 357 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 SPRED1Q7Z699 444 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ADGRF3Q8IZF5 1079 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 FAM9CQ8IZT9 166 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ANKRD53Q8N9V6 530 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 GLB1L3Q8NCI6 653 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 IFI44Q8TCB0 444 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 CHTF18Q8WVB6 975 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 RSC1A1Q92681 617 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 ROPN1LQ96C74 230 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 CDRT15Q96T59 188 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 PITHD1Q9GZP4 211 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 RHBGQ9H310 441 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 IL1RL2Q9HB29 575 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 SLC6A20Q9NP91 592 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 LEF1Q9UJU2 399 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 CROTQ9UKG9 612 aa13.78□□□□□ -0.2
TTC39A-216ENST00000530004 GOLGA4Q13439 2230 aaKnown RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 COL5A1P20908 1838 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-216ENST00000530004 IGHV1OR21-1A0A087WYE8 117 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 DYTNA2CJ06 578 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 BTN3A3O00478 584 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 TNFSF14O43557 240 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 OR1F1O43749 312 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 EEDO75530 441 aaKnown RBP13.77□□□□□ -0.21
TTC39A-216ENST00000530004 CMPK1P30085 196 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 DGKQP52824 942 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 CLDN8P56748 225 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 CYP4F2P78329 520 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 TLR1Q15399 786 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 WASHC2DQ5SRD0 308 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 RIPOR1Q6ZS17 1223 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 FBXW8Q8N3Y1 598 aa13.77□□□□□ -0.21
TTC39A-216ENST00000530004 Q8N9G6 341 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms